Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-212 | -4.895e+02 | 0.0000 | 194.0 | 27.52% | 463.5 | 0.99% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-179 | -4.127e+02 | 0.0000 | 388.0 | 55.04% | 5143.7 | 10.97% | motif file (matrix) |
svg |
3 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-146 | -3.370e+02 | 0.0000 | 263.0 | 37.30% | 2457.7 | 5.24% | motif file (matrix) |
svg |
4 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-142 | -3.285e+02 | 0.0000 | 345.0 | 48.94% | 4987.3 | 10.64% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-136 | -3.143e+02 | 0.0000 | 330.0 | 46.81% | 4709.1 | 10.04% | motif file (matrix) |
svg |
6 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-117 | -2.699e+02 | 0.0000 | 252.0 | 35.74% | 2953.7 | 6.30% | motif file (matrix) |
svg |
7 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-107 | -2.484e+02 | 0.0000 | 205.0 | 29.08% | 1983.0 | 4.23% | motif file (matrix) |
svg |
8 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-71 | -1.638e+02 | 0.0000 | 140.0 | 19.86% | 1363.4 | 2.91% | motif file (matrix) |
svg |
9 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-67 | -1.564e+02 | 0.0000 | 173.0 | 24.54% | 2337.8 | 4.99% | motif file (matrix) |
svg |
10 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-54 | -1.253e+02 | 0.0000 | 150.0 | 21.28% | 2172.9 | 4.63% | motif file (matrix) |
svg |
11 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-42 | -9.778e+01 | 0.0000 | 98.0 | 13.90% | 1142.0 | 2.44% | motif file (matrix) |
svg |
12 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-41 | -9.444e+01 | 0.0000 | 84.0 | 11.91% | 841.3 | 1.79% | motif file (matrix) |
svg |
13 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-34 | -7.954e+01 | 0.0000 | 78.0 | 11.06% | 882.0 | 1.88% | motif file (matrix) |
svg |
14 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-27 | -6.405e+01 | 0.0000 | 76.0 | 10.78% | 1062.5 | 2.27% | motif file (matrix) |
svg |
15 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-27 | -6.317e+01 | 0.0000 | 89.0 | 12.62% | 1473.0 | 3.14% | motif file (matrix) |
svg |
16 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-23 | -5.436e+01 | 0.0000 | 64.0 | 9.08% | 887.7 | 1.89% | motif file (matrix) |
svg |
17 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-16 | -3.738e+01 | 0.0000 | 88.0 | 12.48% | 2155.8 | 4.60% | motif file (matrix) |
svg |
18 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-15 | -3.485e+01 | 0.0000 | 80.0 | 11.35% | 1927.5 | 4.11% | motif file (matrix) |
svg |
19 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-10 | -2.438e+01 | 0.0000 | 99.0 | 14.04% | 3244.4 | 6.92% | motif file (matrix) |
svg |
20 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-10 | -2.410e+01 | 0.0000 | 54.0 | 7.66% | 1288.9 | 2.75% | motif file (matrix) |
svg |
21 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-9 | -2.087e+01 | 0.0000 | 261.0 | 37.02% | 12467.5 | 26.59% | motif file (matrix) |
svg |
22 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-8 | -1.934e+01 | 0.0000 | 187.0 | 26.52% | 8304.6 | 17.71% | motif file (matrix) |
svg |
23 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-7 | -1.790e+01 | 0.0000 | 59.0 | 8.37% | 1762.1 | 3.76% | motif file (matrix) |
svg |
24 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-6 | -1.431e+01 | 0.0000 | 124.0 | 17.59% | 5317.4 | 11.34% | motif file (matrix) |
svg |
25 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-5 | -1.356e+01 | 0.0000 | 129.0 | 18.30% | 5674.7 | 12.10% | motif file (matrix) |
svg |
26 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-5 | -1.328e+01 | 0.0000 | 74.0 | 10.50% | 2769.0 | 5.91% | motif file (matrix) |
svg |
27 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-5 | -1.304e+01 | 0.0000 | 89.0 | 12.62% | 3561.2 | 7.60% | motif file (matrix) |
svg |
28 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-4 | -1.089e+01 | 0.0002 | 65.0 | 9.22% | 2505.9 | 5.34% | motif file (matrix) |
svg |
29 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -1.056e+01 | 0.0003 | 54.0 | 7.66% | 1977.3 | 4.22% | motif file (matrix) |
svg |
30 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -1.051e+01 | 0.0003 | 245.0 | 34.75% | 13002.5 | 27.73% | motif file (matrix) |
svg |
31 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-4 | -1.025e+01 | 0.0004 | 19.0 | 2.70% | 424.3 | 0.91% | motif file (matrix) |
svg |
32 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -9.141e+00 | 0.0012 | 220.0 | 31.21% | 11704.3 | 24.96% | motif file (matrix) |
svg |
33 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-3 | -9.132e+00 | 0.0012 | 35.0 | 4.96% | 1158.5 | 2.47% | motif file (matrix) |
svg |
34 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-3 | -7.819e+00 | 0.0043 | 122.0 | 17.30% | 6021.5 | 12.84% | motif file (matrix) |
svg |
35 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.521e+00 | 0.0056 | 13.0 | 1.84% | 288.9 | 0.62% | motif file (matrix) |
svg |
36 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-3 | -7.206e+00 | 0.0075 | 19.0 | 2.70% | 542.6 | 1.16% | motif file (matrix) |
svg |
37 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.039e+00 | 0.0086 | 50.0 | 7.09% | 2073.7 | 4.42% | motif file (matrix) |
svg |
38 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.858e+00 | 0.0101 | 50.0 | 7.09% | 2091.1 | 4.46% | motif file (matrix) |
svg |
39 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.788e+00 | 0.0105 | 48.0 | 6.81% | 1992.7 | 4.25% | motif file (matrix) |
svg |
40 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.785e+00 | 0.0105 | 26.0 | 3.69% | 882.9 | 1.88% | motif file (matrix) |
svg |
41 |
| ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.720e+00 | 0.0107 | 60.0 | 8.51% | 2645.4 | 5.64% | motif file (matrix) |
svg |
42 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.307e+00 | 0.0158 | 22.0 | 3.12% | 724.6 | 1.55% | motif file (matrix) |
svg |
43 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.287e+00 | 0.0158 | 16.0 | 2.27% | 456.8 | 0.97% | motif file (matrix) |
svg |
44 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -6.115e+00 | 0.0183 | 29.0 | 4.11% | 1074.6 | 2.29% | motif file (matrix) |
svg |
45 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-2 | -6.108e+00 | 0.0183 | 51.0 | 7.23% | 2224.4 | 4.74% | motif file (matrix) |
svg |
46 |
| AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.062e+00 | 0.0184 | 36.0 | 5.11% | 1433.3 | 3.06% | motif file (matrix) |
svg |
47 |
| AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer | 1e-2 | -6.056e+00 | 0.0184 | 46.0 | 6.52% | 1960.3 | 4.18% | motif file (matrix) |
svg |
48 |
| ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer | 1e-2 | -5.856e+00 | 0.0217 | 71.0 | 10.07% | 3369.4 | 7.19% | motif file (matrix) |
svg |
49 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.754e+00 | 0.0236 | 28.0 | 3.97% | 1052.5 | 2.24% | motif file (matrix) |
svg |
50 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.229e+00 | 0.0390 | 24.0 | 3.40% | 893.1 | 1.90% | motif file (matrix) |
svg |
51 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.199e+00 | 0.0394 | 30.0 | 4.26% | 1200.0 | 2.56% | motif file (matrix) |
svg |
52 |
| IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer | 1e-2 | -5.071e+00 | 0.0439 | 20.0 | 2.84% | 708.3 | 1.51% | motif file (matrix) |
svg |
53 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.053e+00 | 0.0439 | 8.0 | 1.13% | 179.2 | 0.38% | motif file (matrix) |
svg |
54 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -5.053e+00 | 0.0439 | 58.0 | 8.23% | 2744.4 | 5.85% | motif file (matrix) |
svg |
55 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -4.805e+00 | 0.0542 | 33.0 | 4.68% | 1395.0 | 2.98% | motif file (matrix) |
svg |
56 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -4.614e+00 | 0.0644 | 60.0 | 8.51% | 2922.5 | 6.23% | motif file (matrix) |
svg |