Homer Known Motif Enrichment Results (hs_Embryonic_HUES64_normal_SOX2_SRX702107_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 705, Total Background Sequences = 46818
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-212-4.895e+020.0000194.027.52%463.50.99%motif file (matrix) svg
2 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-179-4.127e+020.0000388.055.04%5143.710.97%motif file (matrix) svg
3 A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer1e-146-3.370e+020.0000263.037.30%2457.75.24%motif file (matrix) svg
4 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-142-3.285e+020.0000345.048.94%4987.310.64%motif file (matrix) svg
5 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-136-3.143e+020.0000330.046.81%4709.110.04%motif file (matrix) svg
6 C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer1e-117-2.699e+020.0000252.035.74%2953.76.30%motif file (matrix) svg
7 A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer1e-107-2.484e+020.0000205.029.08%1983.04.23%motif file (matrix) svg
8 C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-71-1.638e+020.0000140.019.86%1363.42.91%motif file (matrix) svg
9 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-67-1.564e+020.0000173.024.54%2337.84.99%motif file (matrix) svg
10 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-54-1.253e+020.0000150.021.28%2172.94.63%motif file (matrix) svg
11 G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer1e-42-9.778e+010.000098.013.90%1142.02.44%motif file (matrix) svg
12 G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer1e-41-9.444e+010.000084.011.91%841.31.79%motif file (matrix) svg
13 C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer1e-34-7.954e+010.000078.011.06%882.01.88%motif file (matrix) svg
14 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-27-6.405e+010.000076.010.78%1062.52.27%motif file (matrix) svg
15 A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer1e-27-6.317e+010.000089.012.62%1473.03.14%motif file (matrix) svg
16 G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-23-5.436e+010.000064.09.08%887.71.89%motif file (matrix) svg
17 T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-16-3.738e+010.000088.012.48%2155.84.60%motif file (matrix) svg
18 G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-15-3.485e+010.000080.011.35%1927.54.11%motif file (matrix) svg
19 A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-10-2.438e+010.000099.014.04%3244.46.92%motif file (matrix) svg
20 A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-10-2.410e+010.000054.07.66%1288.92.75%motif file (matrix) svg
21 C T A G T A C G G A T C G T A C G C T A A G C T A G C T G T C A T C G A T A G C Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-9-2.087e+010.0000261.037.02%12467.526.59%motif file (matrix) svg
22 A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer1e-8-1.934e+010.0000187.026.52%8304.617.71%motif file (matrix) svg
23 A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer1e-7-1.790e+010.000059.08.37%1762.13.76%motif file (matrix) svg
24 C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-6-1.431e+010.0000124.017.59%5317.411.34%motif file (matrix) svg
25 A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-5-1.356e+010.0000129.018.30%5674.712.10%motif file (matrix) svg
26 T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer1e-5-1.328e+010.000074.010.50%2769.05.91%motif file (matrix) svg
27 C G T A C A T G A G T C G A C T T G C A C G T A A C G T A C G T C T G A T C A G Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer1e-5-1.304e+010.000089.012.62%3561.27.60%motif file (matrix) svg
28 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-4-1.089e+010.000265.09.22%2505.95.34%motif file (matrix) svg
29 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer1e-4-1.056e+010.000354.07.66%1977.34.22%motif file (matrix) svg
30 C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-4-1.051e+010.0003245.034.75%13002.527.73%motif file (matrix) svg
31 C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-4-1.025e+010.000419.02.70%424.30.91%motif file (matrix) svg
32 C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-3-9.141e+000.0012220.031.21%11704.324.96%motif file (matrix) svg
33 C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-3-9.132e+000.001235.04.96%1158.52.47%motif file (matrix) svg
34 A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer1e-3-7.819e+000.0043122.017.30%6021.512.84%motif file (matrix) svg
35 C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-7.521e+000.005613.01.84%288.90.62%motif file (matrix) svg
36 C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-3-7.206e+000.007519.02.70%542.61.16%motif file (matrix) svg
37 C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-3-7.039e+000.008650.07.09%2073.74.42%motif file (matrix) svg
38 C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-2-6.858e+000.010150.07.09%2091.14.46%motif file (matrix) svg
39 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-6.788e+000.010548.06.81%1992.74.25%motif file (matrix) svg
40 C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer1e-2-6.785e+000.010526.03.69%882.91.88%motif file (matrix) svg
41 C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-2-6.720e+000.010760.08.51%2645.45.64%motif file (matrix) svg
42 C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer1e-2-6.307e+000.015822.03.12%724.61.55%motif file (matrix) svg
43 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-6.287e+000.015816.02.27%456.80.97%motif file (matrix) svg
44 C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-6.115e+000.018329.04.11%1074.62.29%motif file (matrix) svg
45 T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-2-6.108e+000.018351.07.23%2224.44.74%motif file (matrix) svg
46 G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-6.062e+000.018436.05.11%1433.33.06%motif file (matrix) svg
47 A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-2-6.056e+000.018446.06.52%1960.34.18%motif file (matrix) svg
48 T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-2-5.856e+000.021771.010.07%3369.47.19%motif file (matrix) svg
49 C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T G A T C G T A C Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-2-5.754e+000.023628.03.97%1052.52.24%motif file (matrix) svg
50 A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-2-5.229e+000.039024.03.40%893.11.90%motif file (matrix) svg
51 T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.199e+000.039430.04.26%1200.02.56%motif file (matrix) svg
52 T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer1e-2-5.071e+000.043920.02.84%708.31.51%motif file (matrix) svg
53 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-2-5.053e+000.04398.01.13%179.20.38%motif file (matrix) svg
54 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-2-5.053e+000.043958.08.23%2744.45.85%motif file (matrix) svg
55 T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer1e-2-4.805e+000.054233.04.68%1395.02.98%motif file (matrix) svg
56 C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-2-4.614e+000.064460.08.51%2922.56.23%motif file (matrix) svg