Information for 5-AACAAAAGCCCAACAG (Motif 8)

T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G C T C G A T C A T G A C T G A C T G G A T C A C G T A C G T A C G T A C G T C T A G A C G T A C G T
p-value:1e-14
log p-value:-3.311e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.3 +/- 12.7bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAAGCCCAACAG
AGAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AACAAAAGCCCAACAG
AAAACAAAGG--------
 A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAAGCCCAACAG
ATAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AACAAAAGCCCAACAG
RACAAWGG--------
 T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AACAAAAGCCCAACAG
RNAACAATGG--------
 A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:AACAAAAGCCCAACAG----
---AACACCAAAACAAAGGA
 T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AACAAAAGCCCAACAG
AATAAAGAACAATAGAATTTCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:8
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------AACAAAAGCCCAACAG
ATATCAAAACAAAACA-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AACAAAAGCCCAACAG
AACAAT----------
 T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AACAAAAGCCCAACAG
GAACAATGGN-------
 A C G T T C G A C G T A A G T C C G T A C G T A G T C A C G T A C A T G A G T C G T A C G A T C C G T A C T G A A G T C C G T A A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T