p-value: | 1e-9 |
log p-value: | -2.295e+01 |
Information Content per bp: | 1.673 |
Number of Target Sequences with motif | 55.0 |
Percentage of Target Sequences with motif | 7.80% |
Number of Background Sequences with motif | 1370.1 |
Percentage of Background Sequences with motif | 2.92% |
Average Position of motif in Targets | 42.8 +/- 26.3bp |
Average Position of motif in Background | 50.0 +/- 31.4bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox6/MA0515.1/Jaspar
Match Rank: | 1 |
Score: | 0.82 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT- -CCATTGTTTT |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 2 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCCATTGTCT NCCATTGTTY |
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PB0168.1_Sox14_2/Jaspar
Match Rank: | 3 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCCATTGTCT--- NNNCCATTGTGTNAN |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 4 |
Score: | 0.79 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT- -CCATTGTTYB |
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Sox17/MA0078.1/Jaspar
Match Rank: | 5 |
Score: | 0.78 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT CTCATTGTC- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 6 |
Score: | 0.75 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT -CCWTTGTY- |
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Sox2/MA0143.3/Jaspar
Match Rank: | 7 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT -CCTTTGTT- |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.73 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT- -CCWTTGTYYB |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.72 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT NCCATTGTTC |
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SOX9/MA0077.1/Jaspar
Match Rank: | 10 |
Score: | 0.72 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCCATTGTCT -CCATTGTTC |
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