Information for 7-TKTTAKTCWRARRCAA (Motif 11)

A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
Reverse Opposite:
A C G T A C G T A C T G G A C T A G T C A C G T A G T C C G A T A C T G C G T A G T C A A C G T C G T A C G T A G T A C C G T A
p-value:1e-13
log p-value:-3.180e+01
Information Content per bp:1.843
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.9 +/- 20.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----TKTTAKTCWRARRCAA
NCNTTTGTTATTTNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TKTTAKTCWRARRCAA
NNANTTTTATTGGNNN----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G A C G T A C G T A C G T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TKTTAKTCWRARRCAA
CTTTGTTATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:TKTTAKTCWRARRCAA---
---------AAAACAATGG
 A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---TKTTAKTCWRARRCAA
CATTGTTATGCAAAT----
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:6
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TKTTAKTCWRARRCAA----
--WNAGTCADAVTGAAACTN
 A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G

PH0075.1_Hoxd10/Jaspar

Match Rank:7
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----TKTTAKTCWRARRCAA
NTNAATTTTATTGNATT----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T A C G T A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----TKTTAKTCWRARRCAA
NTNTTGTTGTTTGTN-----
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.49
Offset:8
Orientation:forward strand
Alignment:TKTTAKTCWRARRCAA-
--------GTAAACAAT
 A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--TKTTAKTCWRARRCAA
NCTGTCAATCAN------
 A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C G T C G A T A G T C C G T A C T A G C G T A C T A G C T G A A G T C C G T A G T C A
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T