Information for 3-CTGAGCCAAT (Motif 8)

A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T
Reverse Opposite:
C G T A A C G T G C A T A C T G A C T G A G T C C G A T A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.396e+01
Information Content per bp:1.856
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif74.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.8 +/- 28.4bp
Average Position of motif in Background51.2 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CTGAGCCAAT---
---AGCCAATCGG
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CTGAGCCAAT--
ACTAGCCAATCA
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CTGAGCCAAT---
AAATGGACCAATCAG
 A C G T A C G T A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTGAGCCAAT
---TGCCAA-
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGAGCCAAT
-CGTGCCAAG
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

PH0009.1_Bsx/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGAGCCAAT------
NTNAGNTAATTACCTN
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G A C T A T C G T C G A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A G T A C G A T C A C G T A C T G

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGAGCCAAT
ATAATCCC--
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGAGCCAAT---------
-TGGACCAATCAGCACTCT
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGAGCCAAT
TGCTGAGTCA--
 A C G T A C G T A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGAGCCAAT-
-GGTGCCAAGT
 A G T C A C G T T C A G C G T A C T A G A G T C G T A C C G T A G T C A A C G T A C G T
A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T