Information for 3-GGAASWKRTGTCC (Motif 3)

A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
Reverse Opposite:
A C T G A C T G C G T A G T A C C G T A A G C T G T C A C G A T A T G C A C G T A C G T A G T C A G T C
p-value:1e-11
log p-value:-2.705e+01
Information Content per bp:1.879
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.8 +/- 19.6bp
Average Position of motif in Background13.8 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0047.1_Myf6_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGAASWKRTGTCC-
GAAGAACAGGTGTCCG
 A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

NEUROG2/MA0669.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGAASWKRTGTCC
--AACATATGTC-
 A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GGAASWKRTGTCC
TTAAGAGGAAGTTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAASWKRTGTCC
VAGRACAKWCTGTYC
 A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGAASWKRTGTCC-
NAGNACANNNTGTNCT
 A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAASWKRTGTCC
AGGGAAGTCATTTCT
 A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGAASWKRTGTCC
AVCAGGAAGT-------
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF5/MA0136.2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----GGAASWKRTGTCC
ACCCGGAAGTA------
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
C G T A T G A C T A G C T G A C C A T G C A T G G T C A G C T A T C A G G A C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGAASWKRTGTCC
AGCGGAAGTG------
 A C G T A C G T A C G T A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

MYF6/MA0667.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGAASWKRTGTCC
--AACAGCTGTT-
 A C T G A C T G C G T A C G T A A T C G C G T A A C G T C T G A A C G T A C T G A C G T A G T C A G T C
A C G T A C G T T C G A T C G A A G T C T C G A T C A G A G T C C G A T A T C G G A C T A G C T A C G T