Information for 5-CCGGACGGCCCTCGGT (Motif 14)

A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C T G C G T A A C T G A C T G A C T G A G T C A G T C A C T G A C G T A G T C A G T C A C T G A C T G
p-value:1e-4
log p-value:-1.097e+01
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 22.8bp
Average Position of motif in Background74.6 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:1
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCGGACGGCCCTCGGT
--GGACCACCCACG--
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCGGACGGCCCTCGGT
CCAGACRSVB------
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCGGACGGCCCTCGGT
ACCGGAAG---------
 A C G T A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CCGGACGGCCCTCGGT
ACCGGAAGTG-------
 A C G T A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CCGGACGGCCCTCGGT
----AAGACCCYYN--
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T C G A T G C A A C T G G T C A A G T C A G T C A G T C A G T C A G C T T G A C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CCGGACGGCCCTCGGT
CCAGACAG--------
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.47
Offset:4
Orientation:forward strand
Alignment:CCGGACGGCCCTCGGT---
----ACCACTCTCGGTCAC
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

ETV1/MA0761.1/Jaspar

Match Rank:8
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CCGGACGGCCCTCGGT
ACCGGAAGTA-------
 A C G T A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--CCGGACGGCCCTCGGT
ANCCGGAAGT--------
 A C G T A C G T A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.47
Offset:3
Orientation:forward strand
Alignment:CCGGACGGCCCTCGGT--
---GACCCCCCGCTGTGC
 A G T C A G T C A C T G A C T G C G T A A G T C A C T G A C T G A G T C A G T C A G T C A C G T A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C