Information for 6-GADAAAGRGWCAG (Motif 12)

C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
Reverse Opposite:
G T A C A C G T A C T G C G T A A T G C A G T C A G T C G A C T A G C T A C G T G A C T A C G T G A T C
p-value:1e-6
log p-value:-1.543e+01
Information Content per bp:1.691
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif3.87%
Number of Background Sequences with motif234.0
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets39.3 +/- 27.5bp
Average Position of motif in Background50.3 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

JUN(var.2)/MA0489.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GADAAAGRGWCAG
AGGAGATGACTCAT
 A C G T C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GADAAAGRGWCAG
GGAGAAAGGTGCGA
 A C G T C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

JUNB/MA0490.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GADAAAGRGWCAG
--GGATGACTCAT
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GADAAAGRGWCAG
--GGATGACTCAT
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GADAAAGRGWCAG
-GAAATGACTCA-
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
A C G T C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GADAAAGRGWCAG-
---GGTGACTCATG
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G A C G T
A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

FOS/MA0476.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GADAAAGRGWCAG-
---NATGAGTCANN
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G A C G T
A C G T A C G T A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GADAAAGRGWCAG
RACAAWGG-----
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GADAAAGRGWCAG
----AGRGGTCA-
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GADAAAGRGWCAG
AACAAAGG-----
 C T A G C G T A C T G A C G T A C T G A C T G A C T A G T C A G A T C G C G A T G T A C G T C A A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T