Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-85 | -1.961e+02 | 0.0000 | 103.0 | 14.03% | 431.3 | 0.90% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-58 | -1.348e+02 | 0.0000 | 226.0 | 30.79% | 4485.7 | 9.39% | motif file (matrix) |
svg |
3 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-44 | -1.026e+02 | 0.0000 | 195.0 | 26.57% | 4180.8 | 8.75% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-36 | -8.410e+01 | 0.0000 | 125.0 | 17.03% | 2141.1 | 4.48% | motif file (matrix) |
svg |
5 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-31 | -7.207e+01 | 0.0000 | 89.0 | 12.13% | 1268.3 | 2.65% | motif file (matrix) |
svg |
6 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-30 | -7.062e+01 | 0.0000 | 172.0 | 23.43% | 4296.4 | 8.99% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-30 | -6.972e+01 | 0.0000 | 129.0 | 17.57% | 2638.4 | 5.52% | motif file (matrix) |
svg |
8 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-29 | -6.788e+01 | 0.0000 | 80.0 | 10.90% | 1085.3 | 2.27% | motif file (matrix) |
svg |
9 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-27 | -6.378e+01 | 0.0000 | 110.0 | 14.99% | 2120.7 | 4.44% | motif file (matrix) |
svg |
10 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-26 | -6.113e+01 | 0.0000 | 73.0 | 9.95% | 1003.7 | 2.10% | motif file (matrix) |
svg |
11 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-25 | -5.882e+01 | 0.0000 | 100.0 | 13.62% | 1901.3 | 3.98% | motif file (matrix) |
svg |
12 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-24 | -5.695e+01 | 0.0000 | 60.0 | 8.17% | 720.3 | 1.51% | motif file (matrix) |
svg |
13 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-24 | -5.656e+01 | 0.0000 | 106.0 | 14.44% | 2174.8 | 4.55% | motif file (matrix) |
svg |
14 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-23 | -5.402e+01 | 0.0000 | 79.0 | 10.76% | 1319.6 | 2.76% | motif file (matrix) |
svg |
15 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-22 | -5.283e+01 | 0.0000 | 75.0 | 10.22% | 1219.9 | 2.55% | motif file (matrix) |
svg |
16 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-22 | -5.076e+01 | 0.0000 | 93.0 | 12.67% | 1871.8 | 3.92% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-21 | -4.983e+01 | 0.0000 | 89.0 | 12.13% | 1755.9 | 3.68% | motif file (matrix) |
svg |
18 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-20 | -4.781e+01 | 0.0000 | 89.0 | 12.13% | 1811.7 | 3.79% | motif file (matrix) |
svg |
19 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.957e+01 | 0.0000 | 24.0 | 3.27% | 354.8 | 0.74% | motif file (matrix) |
svg |
20 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-8 | -1.953e+01 | 0.0000 | 36.0 | 4.90% | 743.8 | 1.56% | motif file (matrix) |
svg |
21 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-8 | -1.941e+01 | 0.0000 | 43.0 | 5.86% | 1004.7 | 2.10% | motif file (matrix) |
svg |
22 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.914e+01 | 0.0000 | 29.0 | 3.95% | 516.9 | 1.08% | motif file (matrix) |
svg |
23 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-7 | -1.767e+01 | 0.0000 | 47.0 | 6.40% | 1228.2 | 2.57% | motif file (matrix) |
svg |
24 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-7 | -1.746e+01 | 0.0000 | 75.0 | 10.22% | 2469.7 | 5.17% | motif file (matrix) |
svg |
25 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-7 | -1.734e+01 | 0.0000 | 41.0 | 5.59% | 1002.2 | 2.10% | motif file (matrix) |
svg |
26 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-7 | -1.707e+01 | 0.0000 | 37.0 | 5.04% | 858.6 | 1.80% | motif file (matrix) |
svg |
27 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-6 | -1.515e+01 | 0.0000 | 44.0 | 5.99% | 1214.9 | 2.54% | motif file (matrix) |
svg |
28 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.275e+01 | 0.0000 | 46.0 | 6.27% | 1421.9 | 2.98% | motif file (matrix) |
svg |
29 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-4 | -9.417e+00 | 0.0010 | 18.0 | 2.45% | 405.1 | 0.85% | motif file (matrix) |
svg |
30 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-3 | -9.111e+00 | 0.0013 | 65.0 | 8.86% | 2605.8 | 5.45% | motif file (matrix) |
svg |
31 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-3 | -8.589e+00 | 0.0022 | 12.0 | 1.63% | 218.2 | 0.46% | motif file (matrix) |
svg |
32 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-3 | -8.441e+00 | 0.0025 | 15.0 | 2.04% | 326.3 | 0.68% | motif file (matrix) |
svg |
33 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.259e+00 | 0.0029 | 74.0 | 10.08% | 3164.5 | 6.62% | motif file (matrix) |
svg |
34 |
| Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer | 1e-3 | -7.979e+00 | 0.0037 | 11.0 | 1.50% | 201.0 | 0.42% | motif file (matrix) |
svg |
35 |
| Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer | 1e-3 | -7.784e+00 | 0.0043 | 33.0 | 4.50% | 1125.4 | 2.36% | motif file (matrix) |
svg |
36 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.689e+00 | 0.0046 | 229.0 | 31.20% | 12270.9 | 25.68% | motif file (matrix) |
svg |
37 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -7.653e+00 | 0.0047 | 69.0 | 9.40% | 2964.2 | 6.20% | motif file (matrix) |
svg |
38 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-3 | -7.319e+00 | 0.0063 | 68.0 | 9.26% | 2948.6 | 6.17% | motif file (matrix) |
svg |
39 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-3 | -7.301e+00 | 0.0063 | 22.0 | 3.00% | 654.5 | 1.37% | motif file (matrix) |
svg |
40 |
| Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer | 1e-3 | -6.941e+00 | 0.0088 | 68.0 | 9.26% | 2992.8 | 6.26% | motif file (matrix) |
svg |
41 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-3 | -6.939e+00 | 0.0088 | 150.0 | 20.44% | 7666.0 | 16.05% | motif file (matrix) |
svg |
42 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-3 | -6.920e+00 | 0.0088 | 48.0 | 6.54% | 1936.2 | 4.05% | motif file (matrix) |
svg |
43 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-2 | -6.657e+00 | 0.0109 | 110.0 | 14.99% | 5382.3 | 11.27% | motif file (matrix) |
svg |
44 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.512e+00 | 0.0123 | 53.0 | 7.22% | 2238.4 | 4.69% | motif file (matrix) |
svg |
45 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.412e+00 | 0.0133 | 214.0 | 29.16% | 11632.1 | 24.35% | motif file (matrix) |
svg |
46 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-2 | -6.130e+00 | 0.0172 | 33.0 | 4.50% | 1246.3 | 2.61% | motif file (matrix) |
svg |
47 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.921e+00 | 0.0208 | 107.0 | 14.58% | 5332.6 | 11.16% | motif file (matrix) |
svg |
48 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -5.747e+00 | 0.0242 | 39.0 | 5.31% | 1584.8 | 3.32% | motif file (matrix) |
svg |
49 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.736e+00 | 0.0242 | 71.0 | 9.67% | 3312.5 | 6.93% | motif file (matrix) |
svg |
50 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -5.668e+00 | 0.0251 | 12.0 | 1.63% | 308.6 | 0.65% | motif file (matrix) |
svg |
51 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -5.567e+00 | 0.0273 | 57.0 | 7.77% | 2562.1 | 5.36% | motif file (matrix) |
svg |
52 |
| Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer | 1e-2 | -5.513e+00 | 0.0282 | 120.0 | 16.35% | 6166.3 | 12.91% | motif file (matrix) |
svg |
53 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-2 | -5.500e+00 | 0.0282 | 47.0 | 6.40% | 2030.1 | 4.25% | motif file (matrix) |
svg |
54 |
| Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer | 1e-2 | -5.459e+00 | 0.0287 | 7.0 | 0.95% | 129.7 | 0.27% | motif file (matrix) |
svg |
55 |
| ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.453e+00 | 0.0287 | 42.0 | 5.72% | 1770.9 | 3.71% | motif file (matrix) |
svg |
56 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -5.410e+00 | 0.0291 | 67.0 | 9.13% | 3135.4 | 6.56% | motif file (matrix) |
svg |
57 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.281e+00 | 0.0325 | 27.0 | 3.68% | 1017.3 | 2.13% | motif file (matrix) |
svg |
58 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -5.235e+00 | 0.0334 | 34.0 | 4.63% | 1375.6 | 2.88% | motif file (matrix) |
svg |
59 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.200e+00 | 0.0340 | 5.0 | 0.68% | 72.6 | 0.15% | motif file (matrix) |
svg |
60 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.184e+00 | 0.0340 | 12.0 | 1.63% | 329.0 | 0.69% | motif file (matrix) |
svg |
61 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-2 | -5.030e+00 | 0.0390 | 44.0 | 5.99% | 1923.1 | 4.03% | motif file (matrix) |
svg |
62 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.008e+00 | 0.0393 | 51.0 | 6.95% | 2305.1 | 4.82% | motif file (matrix) |
svg |
63 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -4.958e+00 | 0.0406 | 12.0 | 1.63% | 338.3 | 0.71% | motif file (matrix) |
svg |
64 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.874e+00 | 0.0435 | 5.0 | 0.68% | 78.3 | 0.16% | motif file (matrix) |
svg |
65 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-2 | -4.832e+00 | 0.0447 | 38.0 | 5.18% | 1625.9 | 3.40% | motif file (matrix) |
svg |
66 |
| Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.783e+00 | 0.0462 | 63.0 | 8.58% | 3002.2 | 6.28% | motif file (matrix) |
svg |