Information for 22-GTGGTTGTCTGYTTGA (Motif 33)

T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
Reverse Opposite:
C G A T G A T C G T C A C T G A C T A G A T G C C G T A A C T G T C G A G T A C C G T A G T C A G A T C G T A C C G T A A G T C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.698
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.8 +/- 19.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GTGGTTGTCTGYTTGA
----TWGTCTGV----
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGGTTGTCTGYTTGA
--VBSYGTCTGG----
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTGTCTGYTTGA-
NNTGTTCTTTTTTGTTTACT
 A C G T A C G T A C G T T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A A C G T
G C A T G C T A C G A T A T C G G C A T C G A T G A T C G A C T G C A T A G C T A G C T A G C T G C A T T C A G A C G T A C G T A C G T C T G A G A T C G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GTGGTTGTCTGYTTGA
----CTGTCTGG----
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:GTGGTTGTCTGYTTGA
--------TTGATTGN
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTGTCTGYTTGA
NNTGTGGTTT---------
 A C G T A C G T A C G T T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGGTTGTCTGYTTGA
NNNNTTGTGTGCTTNN
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTGTCTGYTTGA
NNHTGTGGTTWN--------
 A C G T A C G T A C G T A C G T T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGTTGTCTGYTTGA
GTGGAT----------
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTGGTTGTCTGYTTGA-
NNTNNTGTCTGGNNTNG
 T A C G A C G T A C T G C A T G C A G T C G A T A C T G A C G T G T A C A C G T A T C G G A T C A G C T A C G T C T A G C G T A A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G