Information for 20-GTTTCGCTAATTT (Motif 29)

A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T C G T A A T C G G A T C A C T G C G T A C G T A C G T A T A G C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 23.4bp
Average Position of motif in Background65.5 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA5/MA0158.1/Jaspar

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GTTTCGCTAATTT
----CACTAATT-
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

PB0035.1_Irf5_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCGCTAATTT
NTGGTTTCGGTTNNN-
 A C G T A C G T A C G T A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T A C G T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCGCTAATTT
TNTGGTTTCGATACN--
 A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G A C G T A C G T

PB0162.1_Sfpi1_2/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTTTCGCTAATTT-
GGTTCCNNAATTTG
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C G A T G C A T A G T C A G T C A C T G C A T G G C T A C G T A C G A T G A C T C A G T C A T G

PB0036.1_Irf6_1/Jaspar

Match Rank:5
Score:0.66
Offset:-6
Orientation:reverse strand
Alignment:------GTTTCGCTAATTT
NNNTTGGTTTCGNTNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTTTCGCTAATTT-----
-NTTCGCTAATTAGCTNT
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

Dlx1/MA0879.1/Jaspar

Match Rank:7
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTTTCGCTAATTT--
-----NNTAATTANN
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G

PH0036.1_Gsx2/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTTCGCTAATTT----
-NTNNGCTAATTANCNT
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

GBX1/MA0889.1/Jaspar

Match Rank:9
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GTTTCGCTAATTT--
-----GCTAATTAGN
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C C G A T C T G A C T G A A C G T A G C T C T G A T A C G A G C T

PH0110.1_Nkx1-2/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTTTCGCTAATTT-----
-GTGCACTAATTAGTGCA
 A T C G A C G T A C G T A C G T A G T C C T A G A T G C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C A G T A C T G T G A C T C G A G A T C G A C T G T C A C G T A C G A T A C G T C T G A C T A G A C G T C T A G A T G C G C T A