Information for 16-GTGGTTTCTTTGT (Motif 19)

C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T
Reverse Opposite:
C T G A A G T C C G T A C G T A C G T A A T C G G T C A C G T A C G T A G A T C G T A C C G T A A G T C
p-value:1e-10
log p-value:-2.374e+01
Information Content per bp:1.838
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif20.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets48.4 +/- 14.9bp
Average Position of motif in Background50.4 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:GTGGTTTCTTTGT------
---ANTCCTTTGTCTNNNN
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGGTTTCTTTGT
GAATGTTTGTTT--
 A C G T C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGTTTCTTTGT
-AGGVNCCTTTGT
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGGTTTCTTTGT------
--TNNTCCTTTGTTCTNNT
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTGGTTTCTTTGT------
--NNNTCCTTTGTTCTNNN
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.62
Offset:7
Orientation:forward strand
Alignment:GTGGTTTCTTTGT
-------CTTTGT
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GTGGTTTCTTTGT---
------CCWTTGTYYB
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:8
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GTGGTTTCTTTGT---
------YCTTTGTTCC
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GTGGTTTCTTTGT---
------CCTTTGTTTT
 C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTTCTTTGT
NNTGTGGTTT------
 A C G T A C G T A C G T C T A G A C G T A C T G C T A G A C G T A C G T A C G T A T G C C G A T A C G T A C G T C T A G A G C T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T