Information for 13-GCCTGGATGTGTT (Motif 9)

A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T
Reverse Opposite:
C G T A G T C A G T A C C G T A A G T C G T C A C G A T A G T C A G T C C G T A A C T G A C T G A T G C
p-value:1e-11
log p-value:-2.613e+01
Information Content per bp:1.860
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 28.5bp
Average Position of motif in Background38.6 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCCTGGATGTGTT
-ACAGGATGTGGT
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T
A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCTGGATGTGTT-
--NTGGGTGTGGCC
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T
A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GCCTGGATGTGTT---
----NNHTGTGGTTWN
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTGGATGTGTT
---TGGGTGTGGC
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T
A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCTGGATGTGTT-
---TGGGTGTGGCN
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GCCTGGATGTGTT-
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCTGGATGTGTT--
-----GCTGTGGTTT
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCCTGGATGTGTT--
-----NNTGTGGTTT
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GCCTGGATGTGTT---
------CTGTGGTTTN
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCTGGATGTGTT
ACCCGGATGTA--
 A T C G A G T C G T A C A C G T A C T G C T A G C G T A A C G T A C T G A C G T A C T G C A G T A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A A C G T A C G T