Information for 7-TRCTCTTGAAAGR (Motif 7)

A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
Reverse Opposite:
A G C T A G T C A C G T A C G T A C G T A T G C C G T A C G T A A C T G C G T A A C T G A G C T G T C A
p-value:1e-14
log p-value:-3.250e+01
Information Content per bp:1.868
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.7 +/- 15.3bp
Average Position of motif in Background58.6 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0111.1_Nkx2-2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TRCTCTTGAAAGR-
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TRCTCTTGAAAGR
-CCACTTGAA---
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TRCTCTTGAAAGR--
-AAAGATCAAAGGAA
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TRCTCTTGAAAGR
---ACATCAAAGG
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TRCTCTTGAAAGR
-GCTCGTAAAAA-
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TRCTCTTGAAAGR
---ACWTCAAAGG
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TRCTCTTGAAAGR
NSCACTYVAV---
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TRCTCTTGAAAGR
ACCACTTGAA---
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TRCTCTTGAAAGR--
---ACATCAAAGGNA
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

PB0082.1_Tcf3_1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TRCTCTTGAAAGR----
TATAGATCAAAGGAAAA
 A C G T C T A G A G T C C G A T A G T C A C G T A C G T A T C G C G T A C G T A C G T A C T A G C T A G A C G T A C G T A C G T A C G T
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A