Information for 4-CCAAAGRATGTAR (Motif 5)

A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
Reverse Opposite:
A G T C A C G T C G T A A G T C C G T A A C G T A G C T A G T C A C G T A C G T A C G T A T C G A T C G
p-value:1e-16
log p-value:-3.734e+01
Information Content per bp:1.913
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.3 +/- 18.6bp
Average Position of motif in Background31.7 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD1/MA0090.2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CCAAAGRATGTAR
--NTGGAATGTG-
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
A C G T A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCAAAGRATGTAR-
--ACAGGATGTGGT
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G A C G T
A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCAAAGRATGTAR
--NTGGAATGTN-
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
A C G T A C G T C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAAAGRATGTAR-
---AAGGATATNTN
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G A C G T
A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCAAAGRATGTAR
-AACAGGAAGT--
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCAAAGRATGTAR--
CTACTAGGATGTNNTN
 A C G T A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAAAGRATGTAR
AAACAGACAAAGGAAT---
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAAAGRATGTAR
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0082.1_Tcf3_1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCAAAGRATGTAR
TATAGATCAAAGGAAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A A C G T A C G T

TEAD3/MA0808.1/Jaspar

Match Rank:10
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAAAGRATGTAR
---TGGAATGT--
 A T G C T A G C C G T A C G T A C G T A A C T G C T G A C G T A A C G T A C T G A C G T C G T A C T A G
A C G T A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T A C G T