Information for 2-TTTGTTAGCTGGACTG (Motif 12)

A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
Reverse Opposite:
A T G C C G T A A T C G A C G T A G T C A G T C C G T A A C T G G T A C A C G T C G T A C G T A A G T C C G T A C G T A C G T A
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 21.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTAGCTGGACTG
NCNTTTGTTATTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTAGCTGGACTG
TNNTCCTTTGTTCTNNT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTTGTTAGCTGGACTG
ATTGTT----------
 A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTTGTTAGCTGGACTG
ATTGTTTAN-------
 A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------TTTGTTAGCTGGACTG
NNNTCCTTTGTTCTNNN-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCTGGACTG
CCATTGTTNY--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TTTGTTAGCTGGACTG
NNNTTAGTTAACTNANN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCTGGACTG
CCWTTGTYYB--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TTTGTTAGCTGGACTG-
-------CCWGGAATGY
 A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TTTGTTAGCTGGACTG
CCTTTGTTTT--------
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T G T C A A C T G A G T C A C G T A C T G T A C G G T C A A T G C A C G T A T C G
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T