Information for 15-TCTGAATTCATTG (Motif 11)

A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A C G T A A C G T A C T G G T C A G T C A A C G T A C G T A G T C C G T A A C T G C G T A
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.951
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.0 +/- 31.2bp
Average Position of motif in Background27.0 +/- 2.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0171.1_Sox18_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCTGAATTCATTG-
GGACTGAATTCATGCC
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCTGAATTCATTG---
AATCAATTCAATAATT
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTGAATTCATTG-----
--NNCATTCATTCATNNN
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0005.1_Bbx_1/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCTGAATTCATTG-----
---TAATTCAATGAAGTG
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAATTCATTG-
ATTTGCATACAATGG
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTGAATTCATTG
-ATGACGTCAYYN
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G C A T T G A C C G T A A G C T A G T C T A C G

PH0146.1_Pou3f1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAATTCATTG---
NANTTAATTAATTANNN
 A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T
C A T G G C T A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T G A C T

PH0136.1_Phox2b/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TCTGAATTCATTG--
CNNNTTAATTAATTNNN
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T
A T G C T A G C G A C T T C G A G A C T G A C T T C G A C G T A G A C T A G C T C T G A C T G A A C G T C A G T T G A C A G T C A T C G

PH0149.1_Pou3f4/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTGAATTCATTG----
AATTAATTAATTAATTC
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0037.1_Hdx/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTGAATTCATTG--
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T C A G T A G T C C G T A A C G T A C G T A T C G A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A