Information for 14-GAGCCCTAAGCCA (Motif 10)

A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C G T C G T A A C T G C T A G A C T G A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.536e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.6 +/- 27.0bp
Average Position of motif in Background46.6 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B/MA0811.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
-TGCCCCAGGGCA
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
-TGCCCCCGGGCA
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
-TGCCCCAGGGCA
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
----GCTAATCC-
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAGCCCTAAGCCA-
TTGCCCTAGGGCAT
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
----CTTAATCCC
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GAGCCCTAAGCCA-
------TAATCCCN
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
-----ATAATCCC
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAGCCCTAAGCCA
-----TTAATCCC
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A
A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAGCCCTAAGCCA-
CCGCCCAAGGGCAG
 A C T G C G T A C T A G G T A C A G T C A G T C A C G T G T C A C G T A A C T G A G T C A G T C G T C A A C G T
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G