Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-137 | -3.175e+02 | 0.0000 | 138.0 | 18.80% | 387.5 | 0.81% | motif file (matrix) |
svg |
2 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-55 | -1.279e+02 | 0.0000 | 115.0 | 15.67% | 1149.1 | 2.41% | motif file (matrix) |
svg |
3 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-41 | -9.614e+01 | 0.0000 | 80.0 | 10.90% | 713.7 | 1.50% | motif file (matrix) |
svg |
4 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-39 | -9.050e+01 | 0.0000 | 88.0 | 11.99% | 960.8 | 2.02% | motif file (matrix) |
svg |
5 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-32 | -7.531e+01 | 0.0000 | 166.0 | 22.62% | 3874.7 | 8.13% | motif file (matrix) |
svg |
6 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-27 | -6.377e+01 | 0.0000 | 65.0 | 8.86% | 748.8 | 1.57% | motif file (matrix) |
svg |
7 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-24 | -5.572e+01 | 0.0000 | 144.0 | 19.62% | 3678.6 | 7.72% | motif file (matrix) |
svg |
8 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-23 | -5.392e+01 | 0.0000 | 140.0 | 19.07% | 3581.2 | 7.52% | motif file (matrix) |
svg |
9 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-18 | -4.326e+01 | 0.0000 | 86.0 | 11.72% | 1830.3 | 3.84% | motif file (matrix) |
svg |
10 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-14 | -3.241e+01 | 0.0000 | 87.0 | 11.85% | 2248.2 | 4.72% | motif file (matrix) |
svg |
11 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-11 | -2.684e+01 | 0.0000 | 68.0 | 9.26% | 1701.8 | 3.57% | motif file (matrix) |
svg |
12 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-10 | -2.517e+01 | 0.0000 | 62.0 | 8.45% | 1527.7 | 3.21% | motif file (matrix) |
svg |
13 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-9 | -2.187e+01 | 0.0000 | 76.0 | 10.35% | 2259.8 | 4.74% | motif file (matrix) |
svg |
14 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-9 | -2.116e+01 | 0.0000 | 68.0 | 9.26% | 1946.5 | 4.09% | motif file (matrix) |
svg |
15 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-8 | -2.048e+01 | 0.0000 | 47.0 | 6.40% | 1116.0 | 2.34% | motif file (matrix) |
svg |
16 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-8 | -2.038e+01 | 0.0000 | 18.0 | 2.45% | 185.4 | 0.39% | motif file (matrix) |
svg |
17 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-8 | -1.934e+01 | 0.0000 | 57.0 | 7.77% | 1564.4 | 3.28% | motif file (matrix) |
svg |
18 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-8 | -1.883e+01 | 0.0000 | 24.0 | 3.27% | 367.3 | 0.77% | motif file (matrix) |
svg |
19 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.711e+01 | 0.0000 | 50.0 | 6.81% | 1373.0 | 2.88% | motif file (matrix) |
svg |
20 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-6 | -1.547e+01 | 0.0000 | 57.0 | 7.77% | 1757.5 | 3.69% | motif file (matrix) |
svg |
21 |
| Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer | 1e-6 | -1.495e+01 | 0.0000 | 16.0 | 2.18% | 212.0 | 0.44% | motif file (matrix) |
svg |
22 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-6 | -1.495e+01 | 0.0000 | 61.0 | 8.31% | 1968.4 | 4.13% | motif file (matrix) |
svg |
23 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-5 | -1.297e+01 | 0.0000 | 50.0 | 6.81% | 1584.5 | 3.33% | motif file (matrix) |
svg |
24 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-4 | -1.094e+01 | 0.0003 | 148.0 | 20.16% | 6897.9 | 14.48% | motif file (matrix) |
svg |
25 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-4 | -1.089e+01 | 0.0003 | 218.0 | 29.70% | 10975.5 | 23.04% | motif file (matrix) |
svg |
26 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-4 | -9.561e+00 | 0.0010 | 20.0 | 2.72% | 474.9 | 1.00% | motif file (matrix) |
svg |
27 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-4 | -9.494e+00 | 0.0010 | 47.0 | 6.40% | 1668.2 | 3.50% | motif file (matrix) |
svg |
28 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.941e+00 | 0.0017 | 19.0 | 2.59% | 458.0 | 0.96% | motif file (matrix) |
svg |
29 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-3 | -8.799e+00 | 0.0019 | 64.0 | 8.72% | 2575.6 | 5.41% | motif file (matrix) |
svg |
30 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.670e+00 | 0.0021 | 15.0 | 2.04% | 318.9 | 0.67% | motif file (matrix) |
svg |
31 |
| OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer | 1e-3 | -8.198e+00 | 0.0032 | 9.0 | 1.23% | 133.9 | 0.28% | motif file (matrix) |
svg |
32 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-3 | -7.506e+00 | 0.0063 | 92.0 | 12.53% | 4225.6 | 8.87% | motif file (matrix) |
svg |
33 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-3 | -7.306e+00 | 0.0074 | 4.0 | 0.54% | 25.4 | 0.05% | motif file (matrix) |
svg |
34 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-3 | -6.965e+00 | 0.0101 | 35.0 | 4.77% | 1275.4 | 2.68% | motif file (matrix) |
svg |
35 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -6.909e+00 | 0.0104 | 53.0 | 7.22% | 2190.4 | 4.60% | motif file (matrix) |
svg |
36 |
| NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer | 1e-2 | -6.808e+00 | 0.0112 | 30.0 | 4.09% | 1046.6 | 2.20% | motif file (matrix) |
svg |
37 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.679e+00 | 0.0124 | 85.0 | 11.58% | 3949.8 | 8.29% | motif file (matrix) |
svg |
38 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -6.676e+00 | 0.0124 | 23.0 | 3.13% | 730.7 | 1.53% | motif file (matrix) |
svg |
39 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.414e+00 | 0.0153 | 203.0 | 27.66% | 10925.8 | 22.94% | motif file (matrix) |
svg |
40 |
| HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer | 1e-2 | -6.345e+00 | 0.0160 | 22.0 | 3.00% | 704.3 | 1.48% | motif file (matrix) |
svg |
41 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -6.337e+00 | 0.0160 | 26.0 | 3.54% | 889.5 | 1.87% | motif file (matrix) |
svg |
42 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -6.180e+00 | 0.0179 | 13.0 | 1.77% | 327.8 | 0.69% | motif file (matrix) |
svg |
43 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.003e+00 | 0.0209 | 58.0 | 7.90% | 2555.3 | 5.36% | motif file (matrix) |
svg |
44 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.998e+00 | 0.0209 | 56.0 | 7.63% | 2448.5 | 5.14% | motif file (matrix) |
svg |
45 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.984e+00 | 0.0209 | 98.0 | 13.35% | 4788.6 | 10.05% | motif file (matrix) |
svg |
46 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-2 | -5.949e+00 | 0.0209 | 29.0 | 3.95% | 1060.5 | 2.23% | motif file (matrix) |
svg |
47 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.936e+00 | 0.0209 | 41.0 | 5.59% | 1664.2 | 3.49% | motif file (matrix) |
svg |
48 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.611e+00 | 0.0277 | 61.0 | 8.31% | 2767.4 | 5.81% | motif file (matrix) |
svg |
49 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -5.410e+00 | 0.0332 | 49.0 | 6.68% | 2141.5 | 4.50% | motif file (matrix) |
svg |
50 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -5.189e+00 | 0.0406 | 24.0 | 3.27% | 874.9 | 1.84% | motif file (matrix) |
svg |
51 |
| Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.165e+00 | 0.0408 | 35.0 | 4.77% | 1429.7 | 3.00% | motif file (matrix) |
svg |
52 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.144e+00 | 0.0409 | 31.0 | 4.22% | 1226.3 | 2.57% | motif file (matrix) |
svg |
53 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -4.987e+00 | 0.0469 | 27.0 | 3.68% | 1038.3 | 2.18% | motif file (matrix) |
svg |
54 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-2 | -4.947e+00 | 0.0479 | 59.0 | 8.04% | 2746.7 | 5.77% | motif file (matrix) |
svg |
55 |
| GFY(?)/Promoter/Homer | 1e-2 | -4.903e+00 | 0.0491 | 7.0 | 0.95% | 143.2 | 0.30% | motif file (matrix) |
svg |
56 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -4.852e+00 | 0.0508 | 6.0 | 0.82% | 110.4 | 0.23% | motif file (matrix) |
svg |
57 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-2 | -4.795e+00 | 0.0528 | 93.0 | 12.67% | 4706.1 | 9.88% | motif file (matrix) |
svg |
58 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -4.733e+00 | 0.0553 | 15.0 | 2.04% | 480.8 | 1.01% | motif file (matrix) |
svg |
59 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-2 | -4.676e+00 | 0.0575 | 68.0 | 9.26% | 3291.3 | 6.91% | motif file (matrix) |
svg |