p-value: | 1e-12 |
log p-value: | -2.899e+01 |
Information Content per bp: | 1.660 |
Number of Target Sequences with motif | 46.0 |
Percentage of Target Sequences with motif | 6.27% |
Number of Background Sequences with motif | 829.6 |
Percentage of Background Sequences with motif | 1.74% |
Average Position of motif in Targets | 46.7 +/- 28.1bp |
Average Position of motif in Background | 50.0 +/- 28.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.5 |
Multiplicity (# of sites on avg that occur together) | 1.02 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0065.1_Sox15_1/Jaspar
Match Rank: | 1 |
Score: | 0.87 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTATTGTTC---- ANNTCTATTGTTCNNNA |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 2 |
Score: | 0.87 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCTATTGTTC----- AATCAATTGTTCCGCTA |
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SOX9/MA0077.1/Jaspar
Match Rank: | 3 |
Score: | 0.86 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TCTATTGTTC -CCATTGTTC |
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PB0074.1_Sox8_1/Jaspar
Match Rank: | 4 |
Score: | 0.85 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TCTATTGTTC---- GTATCTATTGTTCTTTA |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 5 |
Score: | 0.85 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTATTGTTC---- NNTTTATTGTTCTNNN |
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PB0073.1_Sox7_1/Jaspar
Match Rank: | 6 |
Score: | 0.84 |
Offset: | -6 |
Orientation: | reverse strand |
Alignment: | ------TCTATTGTTC------ TNNANNTCTATTGTTNTNNANN |
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PB0070.1_Sox30_1/Jaspar
Match Rank: | 7 |
Score: | 0.82 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TCTATTGTTC--- ANNTCCATTGTTCNNN |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 8 |
Score: | 0.82 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTATTGTTC----- CNNNTATTGTTCNNNNN |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TCTATTGTTC NCCATTGTTC |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 10 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCTATTGTTC---- AANTTATTGTTCTNNA |
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