Information for 5-GAAATACAHAATTCCA (Motif 6)

C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
Reverse Opposite:
G C A T C A T G A C T G T C G A C G T A C A G T C G A T C A T G C G A T C T A G A C G T T G C A A C G T A C G T A G C T G T A C
p-value:1e-12
log p-value:-2.983e+01
Information Content per bp:1.670
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif39.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets43.3 +/- 23.8bp
Average Position of motif in Background48.7 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:GAAATACAHAATTCCA--
--------GCATTCCAGN
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAATACAHAATTCCA
-AAACAAACATTC---
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
A C G T C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GAAATACAHAATTCCA
---ATGCATAATTCA-
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
A C G T A C G T A C G T G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAAATACAHAATTCCA
GAAACTGAAACT----
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:5
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAATACAHAATTCCA
ACGAAAGCGAAAGT----
 A C G T A C G T C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T A C G T A C G T A C G T A C G T

FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GAAATACAHAATTCCA--
AGTAAACAAAAAAGAACANN
 A C G T A C G T C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A A C G T A C G T
C G T A C T A G G A C T G T C A G T C A C G T A A G T C C G T A T C G A T C G A T C G A C G T A C T G A C T A G G C T A C G T A T A G C C G T A C G A T C G T A

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GAAATACAHAATTCCA--
--------ATTTTCCATT
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.51
Offset:9
Orientation:forward strand
Alignment:GAAATACAHAATTCCA
---------TTTTCCA
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.51
Offset:7
Orientation:forward strand
Alignment:GAAATACAHAATTCCA-
-------CACATTCCAT
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAAATACAHAATTCCA
GAAAGTGAAAGT----
 C A T G C T G A T G C A G T C A A C G T C G T A G A T C C G T A G T A C C G T A G T C A C G A T A C G T T G A C G A T C C G T A
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T A C G T