Information for 24-ATAVGTATATCTCATT (Motif 40)

G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T
Reverse Opposite:
C G T A C G T A C G A T A C T G C G T A A C T G C G T A C G A T C G T A C G A T C G T A A T G C A C T G A G C T C T G A A C G T
p-value:1e-7
log p-value:-1.713e+01
Information Content per bp:1.772
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 26.1bp
Average Position of motif in Background48.0 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.59
Offset:8
Orientation:forward strand
Alignment:ATAVGTATATCTCATT--
--------AGCTCATTAT
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT------
-----NNNACCTCATTATCNTN
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:3
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT------
-----GCAACCTCATTATNNNN
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

EN1/MA0027.2/Jaspar

Match Rank:4
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT--
----------CTAATTAG
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T T C G A C G T A A C G T A C G T C T G A T A C G

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:5
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT-
---------NCTAATTA
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A

VSX2/MA0726.1/Jaspar

Match Rank:6
Score:0.55
Offset:10
Orientation:forward strand
Alignment:ATAVGTATATCTCATT--
----------CTAATTAG
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.54
Offset:9
Orientation:forward strand
Alignment:ATAVGTATATCTCATT---
---------GCTAATTAGC
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

LHX9/MA0701.1/Jaspar

Match Rank:8
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT--
----------NTAATTGN
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G A C T T G C A C G T A A C G T C A G T C T A G T C A G

MIXL1/MA0662.1/Jaspar

Match Rank:9
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT---
---------NNTAATTANN
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T C G A T T C G A T C G A C G A T A G C T C T G A T C A G G C T A

PAX4/MA0068.2/Jaspar

Match Rank:10
Score:0.54
Offset:10
Orientation:reverse strand
Alignment:ATAVGTATATCTCATT--
----------CTAATTAG
 G T C A A G C T C T G A T A G C A T C G G C A T C G T A C G A T C G T A A C G T A G T C A C G T G T A C C G T A C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G