Information for 20-VCAGCCTSTGGCT (Motif 35)

T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T
Reverse Opposite:
C T G A A T C G T A G C G T A C G C T A T A G C C G T A T C A G C A T G T A G C G C A T C A T G A C T G
p-value:1e-7
log p-value:-1.824e+01
Information Content per bp:1.461
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.18%
Number of Background Sequences with motif165.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets57.3 +/- 20.1bp
Average Position of motif in Background55.4 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:VCAGCCTSTGGCT
--TGCCTGAGGCN
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:VCAGCCTSTGGCT
--NGCCTNAGGCN
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:VCAGCCTSTGGCT
--NGCCTGAGGCN
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:VCAGCCTSTGGCT--
ATTGCCTGAGGCAAT
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.72
Offset:3
Orientation:forward strand
Alignment:VCAGCCTSTGGCT--
---SCCTSAGGSCAW
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T A C G T
A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:VCAGCCTSTGGCT--
ANTGCCTGAGGCAAN
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VCAGCCTSTGGCT
ATGCCCTGAGGC-
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.65
Offset:3
Orientation:forward strand
Alignment:VCAGCCTSTGGCT-
---GTCTGTGGTTT
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:VCAGCCTSTGGCT--
ATTGCCTGAGGCGAA
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:VCAGCCTSTGGCT--
ATTCCCTGAGGGGAA
 T G A C G T A C C G T A A T C G G T A C A G T C G C A T A T C G C G A T C A T G A T C G T A G C G A C T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A