Information for 22-TGCTAGGAAAMTCCCT (Motif 34)

G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
Reverse Opposite:
G C T A A C T G A C T G A C T G C T G A C A T G C A G T A G C T A G C T A G T C A G T C A C G T T C G A A C T G A G T C C G T A
p-value:1e-8
log p-value:-1.857e+01
Information Content per bp:1.704
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets52.3 +/- 31.1bp
Average Position of motif in Background53.7 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAGGAAAMTCCCT
KGTTGCTAGGMAACA----
 A C G T A C G T A C G T G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGCTAGGAAAMTCCCT
-----GGAAATTCCC-
 G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TGCTAGGAAAMTCCCT
-----GGAAATTCCC-
 G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGGAAAMTCCCT
CTTCTGGGAAA------
 A C G T G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCTAGGAAAMTCCCT
-----GGAAANCCCC-
 G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

Stat4/MA0518.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGGAAAMTCCCT
TTTCCAGGAAATGG---
 A C G T G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:TGCTAGGAAAMTCCCT
-----GGAAATCCCC-
 G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

STAT1/MA0137.3/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TGCTAGGAAAMTCCCT
TTTCCAGGAAA------
 A C G T G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TGCTAGGAAAMTCCCT
NGCTTTCTAGGAAN------
 A C G T A C G T A C G T A C G T G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCTAGGAAAMTCCCT
----GGGAAATCCCCN
 G C A T A C T G G T A C A G C T C G T A C T A G T C A G C T G A C T G A G C T A G T A C A G C T A G T C A G T C A G T C C G A T
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T