Information for 21-WMAGCACCTCGGCCAG (Motif 33)

C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
Reverse Opposite:
A G T C A C G T A C T G A T C G A T G C A G T C T C A G C G T A C T A G T A C G A C G T A C T G A G T C C G A T A C T G C G T A
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.760
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.2 +/- 25.0bp
Average Position of motif in Background27.6 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-WMAGCACCTCGGCCAG----
TTCAGCACCATGGACAGCGCC
 A C G T C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WMAGCACCTCGGCCAG----
TCAGCACCATGGACAGCTCC
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:WMAGCACCTCGGCCAG
--TGCCCTGAGGGCA-
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WMAGCACCTCGGCCAG
--TGCCCTGAGGGCA-
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:WMAGCACCTCGGCCAG
--TGCCCTGAGGGCA-
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:WMAGCACCTCGGCCAG
-----AAYTAGGTCA-
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T A C G T A C G T A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WMAGCACCTCGGCCAG
--NVCAGCTGBBNN--
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:WMAGCACCTCGGCCAG----
----NNNNTTGGGCACNNCN
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:WMAGCACCTCGGCCAG
-NTGCCCTTGGGCGN-
 C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-WMAGCACCTCGGCCAG
GTCAGCANNTN------
 A C G T C G A T G T A C C G T A A C T G A G T C G T C A A G T C A G T C A C G T A G T C A C T G A T C G T A G C A G T C C G T A T C A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T A C G T