Information for 19-RTTTKTCMKAKCYKYT (Motif 31)

C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G T G C A C T G A A C T G G T C A A C G T G T C A A C G T C T A G C G T A T G A C C G T A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.806
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.8 +/- 32.5bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0148.1_Mtf1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-RTTTKTCMKAKCYKYT
NNTTTTTCTTATNT---
 A C G T C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
A C T G G C A T A C G T C G A T C G A T C G A T C A G T G T A C C G A T C G A T G T C A C G A T G C A T C A G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RTTTKTCMKAKCYKYT
GNNATTTGTCGTAANN---
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
T C A G G A T C G C A T C G T A C G A T C G A T G A C T A C T G G A C T A G T C A C T G C A G T T C G A C T G A G C T A G C A T A C G T A C G T A C G T

Mecom/MA0029.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:RTTTKTCMKAKCYKYT
TNTTATCTTATCTT--
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RTTTKTCMKAKCYKYT-
NNTTTTCACACCTTNNN
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

PB0115.1_Ehf_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--RTTTKTCMKAKCYKYT
TAGTATTTCCGATCTT--
 A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
C G A T C G T A T C A G C A G T C T G A A C G T C G A T C G A T G A T C G A T C A C T G G C T A G C A T T A G C C G A T G C A T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:RTTTKTCMKAKCYKYT
ATTTTCCATT------
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:RTTTKTCMKAKCYKYT
--TTTTCCA-------
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:RTTTKTCMKAKCYKYT
--YTGWCADY------
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:RTTTKTCMKAKCYKYT
--NTGTCAN-------
 C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----RTTTKTCMKAKCYKYT
NNNNTTTTTTTTTNAAC----
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A G T C G T C A A C G T C G T A A C G T A G T C A G C T A C G T A G T C A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C A C G T A C G T A C G T A C G T