Information for 18-CTGCTAATTCTGT (Motif 29)

A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C T G C G T A C G T A A C G T C G A T C G T A A C T G A G T C C G T A A T C G
p-value:1e-8
log p-value:-1.989e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 26.8bp
Average Position of motif in Background17.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0177.1_Sox7_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGCTAATTCTGT---------
GTGCTAATTGTGTGTGTACGCT
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGCTAATTCTGT-
--GCTATTTTTGGM
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTGCTAATTCTGT-
--KCTATTTTTRGH
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

PH0098.1_Lhx8/Jaspar

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTAATTCTGT--
CACCGCTAATTAGNNGN
A C G T A C G T A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGCTAATTCTGT---
-TTCTATTTTTAGNNN
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Dlx1/MA0879.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CTGCTAATTCTGT
--NNTAATTANN-
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T
A C G T A C G T T A C G T G C A C G A T T G C A G C T A C G A T A C G T C T G A A C T G A C T G A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTGCTAATTCTGT
AAANTGCTGACTNAG-
A C G T A C G T A C G T A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTGCTAATTCTGT
--NCTAATTA---
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T
A C G T A C G T T A C G A G T C A G C T G T C A C G T A A C G T A C G T C T G A A C G T A C G T A C G T

PH0032.1_Evx2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTGCTAATTCTGT--
CACCGCTAATTAGCGGT
A C G T A C G T A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

VSX2/MA0726.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGCTAATTCTGT
---CTAATTAG--
A T G C A C G T A C T G A G T C A C G T C G T A G T C A A C G T A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G T C G A C T G C T A T G C A G A C T G C A T C T G A A C T G A C G T A C G T