Information for 17-CACACGTSYCCTT (Motif 27)

A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A C T G C T G A A T C G C G T A G T A C A T C G A C G T A T C G A C G T A C T G
p-value:1e-8
log p-value:-2.021e+01
Information Content per bp:1.911
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.8 +/- 15.5bp
Average Position of motif in Background43.2 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEY2/MA0649.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACACGTSYCCTT
GGCACGTGNC---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CACACGTSYCCTT-
-GCACGTGTCNNNN
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T A C G T
A C G T A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A

HEY1/MA0823.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CACACGTSYCCTT
GACACGTGCC---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CACACGTSYCCTT
-ACACGTGGC---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C G T G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T

CLOCK/MA0819.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACACGTSYCCTT
AACACGTGTT---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
C T G A T C G A G T A C T C G A G A T C C T A G A C G T A C T G A G C T G A C T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACACGTSYCCTT
--CACGTGDC---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACACGTSYCCTT
NACACGTGCN---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CACACGTSYCCTT
--CACGTGNC---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C A C G T A C G T A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACACGTSYCCTT
-ACACGTGC----
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CACACGTSYCCTT
--CACGTGBN---
 A G T C C G T A A T G C C G T A A T G C A C T G G A C T A T G C A G C T A G T C A G T C A C G T A C G T
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T A C G T A C G T