Information for 4-ATATGCGCAT (Motif 2)

C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T
Reverse Opposite:
C G T A A C G T A C T G A G T C A T C G A G T C C G T A A G C T C T G A A C G T
p-value:1e-15
log p-value:-3.464e+01
Information Content per bp:1.855
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets60.1 +/- 19.7bp
Average Position of motif in Background49.4 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU3F4/MA0789.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:ATATGCGCAT
-TATGCAAAT
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T
A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATATGCGCAT
ATATGCAAAT
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T
G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATATGCGCAT
TTATGCAAAT
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATATGCGCAT---
ATATGCAAATNNN
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

POU2F1/MA0785.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATATGCGCAT-
AATATGCAAATT
 A C G T C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T

NRF(NRF)/Promoter/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ATATGCGCAT----
--GTGCGCATGCGC
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATGCGCAT--
TTATGCAAATTA
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

POU3F2/MA0787.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATATGCGCAT--
TTATGCAAATTA
 C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATATGCGCAT----
TTGTATGCAAATTAGA
 A C G T A C G T C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

Pou2f3/MA0627.1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATATGCGCAT----
TTGTATGCAAATTAGA
 A C G T A C G T C G T A G A C T C T G A A C G T A C T G A T G C A C T G A G T C C G T A C G A T A C G T A C G T A C G T A C G T
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A