Information for 7-VVMTTCASRG (Motif 19)

T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G
Reverse Opposite:
A T G C G A C T A T C G C A G T A T C G T C G A T C G A C A T G A T C G A T C G
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.493
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif199.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets56.7 +/- 24.1bp
Average Position of motif in Background47.8 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:VVMTTCASRG
-GCTTCC---
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:VVMTTCASRG--
-ATTTCCAAGAA
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:VVMTTCASRG-
-HTTTCCCASG
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----VVMTTCASRG---
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

STAT3/MA0144.2/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:VVMTTCASRG---
--TTTCCCAGAAN
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T A C G T
A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:VVMTTCASRG----
--TTTCTNAGAAAN
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:VVMTTCASRG
--ATCCAC--
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G
A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-VVMTTCASRG---
NNNTTTCCTGGAAA
 A C G T T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T A C G T
A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-VVMTTCASRG
TGGTTTCAGT-
 A C G T T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:VVMTTCASRG----
ACATTCATGACACG
 T A G C T A G C G T A C A G C T A G C T A T G C G T C A T A G C C T G A T A C G A C G T A C G T A C G T A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G