Information for 9-AHCCAASACAGGA (Motif 11)

C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G C G A T A T G C A C G T C G A T A C T G T A C G C T A G A G C T
p-value:1e-11
log p-value:-2.700e+01
Information Content per bp:1.664
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif105.2
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets61.2 +/- 26.0bp
Average Position of motif in Background50.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AHCCAASACAGGA--
CAAATCCAGACATCACA
 A C G T A C G T C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AHCCAASACAGGA
------CACAGN-
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:forward strand
Alignment:AHCCAASACAGGA---
------AACAGGAAGT
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AHCCAASACAGGA
----AACAAAGG-
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:AHCCAASACAGGA
-----ACAAAG--
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AHCCAASACAGGA
---CCAGACAG--
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AHCCAASACAGGA-----
------NDCAGGAARTNN
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:AHCCAASACAGGA---
------NACAGGAAAT
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.54
Offset:7
Orientation:forward strand
Alignment:AHCCAASACAGGA----
-------ACAGGAAGTG
 C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AHCCAASACAGGA
TGACANARRCCAGRC
 A C G T A C G T C T G A G A T C A T G C G T A C G C T A G T C A T A C G G C T A T G A C T C G A A C T G T C A G G T C A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C