Information for 9-ACCGWCTGCGCGG (Motif 9)

C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
Reverse Opposite:
A T G C G T A C A C T G A T G C A C T G A G T C C T G A A C T G G C T A A G T C A C T G A T C G A C G T
p-value:1e-9
log p-value:-2.221e+01
Information Content per bp:1.826
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.1 +/- 26.4bp
Average Position of motif in Background53.3 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACCGWCTGCGCGG
CAACGTCCGCGG--
 A C G T C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACCGWCTGCGCGG
-GCGCCTGCGCA-
 C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACCGWCTGCGCGG
-CTGTCTGG----
 C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ACCGWCTGCGCGG
VBSYGTCTGG----
 A C G T C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACCGWCTGCGCGG
-GCGCATGCGCAG
 C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-ACCGWCTGCGCGG
GACCCCCCGCGAAG
 A C G T C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACCGWCTGCGCGG-
NNGCNCTGCGCGGC
 C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G A C G T
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACCGWCTGCGCGG-
CGACCAACTGCCATGC
 A C G T A C G T C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACCGWCTGCGCGG
CGACCAACTGCCGTG
 A C G T A C G T C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:ACCGWCTGCGCGG-
-----CTGCCCGCA
 C G T A A T G C A G T C A C T G C G A T A G T C A G C T A C T G A G T C A T C G G T A C A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A