Information for 3-YCCCCCCTGCCTCCCG (Motif 8)

A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
Reverse Opposite:
G T A C T A C G T A C G A T C G C T G A A C T G T A C G A G T C T C G A C T A G T C A G C A T G A C T G A C T G A T C G T C G A
p-value:1e-9
log p-value:-2.242e+01
Information Content per bp:1.747
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif28.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets50.1 +/- 24.3bp
Average Position of motif in Background52.6 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:YCCCCCCTGCCTCCCG--
---GCCCCGCCCCCTCCC
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G A C G T A C G T
A C G T A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

SP1/MA0079.3/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:YCCCCCCTGCCTCCCG
---GCCCCGCCCCC--
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-YCCCCCCTGCCTCCCG
TCCCCCCCCCCCCCC--
 A C G T A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:YCCCCCCTGCCTCCCG
-NAGCCCCGCCCCCN-
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YCCCCCCTGCCTCCCG
--GGCCCCGCCCCC--
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:YCCCCCCTGCCTCCCG
CCCCCTTGGGCCCC--
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:YCCCCCCTGCCTCCCG-
TACGCCCCGCCACTCTG
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YCCCCCCTGCCTCCCG
---CCCCCCCC-----
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---YCCCCCCTGCCTCCCG
CCCCCGCCCCCGCC-----
 A C G T A C G T A C G T A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YCCCCCCTGCCTCCCG
CCCCCCCCAC------
 A G C T A T G C T A G C T A G C G A T C A G T C A G T C A G C T A C T G A T G C A G T C A G C T A T G C A G T C A T G C A C T G
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T