Information for 5-CTCGGTCCAAGGTCCC (Motif 18)

A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C A G T C A C G T A C G T A C T G A C T G C G T A A G T C A G T C A C T G C G T A A C T G
p-value:1e-5
log p-value:-1.178e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.35%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.3 +/- 22.5bp
Average Position of motif in Background66.4 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-GAGGTCAAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A A C G T

Rxra/MA0512.2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-GGGGTCAAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-----NTCAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T

RXRB/MA0855.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-GGGGTCAAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A A C G T

RXRG/MA0856.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-GGGGTCAAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC
-----BTCAAGGTCA-
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CTCGGTCCAAGGTCCC
------TCAAGGTCAN
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC----
---TATTCAAGGTCATGCGA
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTCGGTCCAAGGTCCC---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:CTCGGTCCAAGGTCCC-
-------CAAGGHCANV
 A G T C A C G T A G T C A C T G A C T G A C G T A G T C A G T C C G T A C G T A A C T G A C T G A C G T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G