Information for 5-GCGTCCAATCAGA (Motif 7)

C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
Reverse Opposite:
A C G T A G T C A C G T A C T G C G T A A C G T A C G T A C T G A C T G C T G A G T A C C T A G A G T C
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.4 +/- 18.5bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GCGTCCAATCAGA
AAATGGACCAATCAG-
 A C G T A C G T A C G T C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GCGTCCAATCAGA-----
TGGACCAATCAGCACTCT
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:forward strand
Alignment:GCGTCCAATCAGA
----CCAATCAA-
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GCGTCCAATCAGA
--AGCCAATCGG-
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCGTCCAATCAGA
ACTAGCCAATCA--
 A C G T C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GCGTCCAATCAGA-
----CAAATCACTG
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

EN1/MA0027.2/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGTCCAATCAGA
----CTAATTAG-
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A T G C G A C T T G C A G T C A A C G T A G C T C G T A T C A G A C G T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGTCCAATCAGA
----CCAATTAA-
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GCGTCCAATCAGA
----CCAATTAG-
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T

ALX3/MA0634.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGTCCAATCAGA
---TCTAATTAAA
 C T A G A G T C A C T G A G C T A G T C A G T C C G T A C G T A A C G T A G T C C G T A A C T G G T C A
A C G T A C G T A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A