Information for 8-CCCTTGCTGA (Motif 14)

G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C T G A C T G
p-value:1e-5
log p-value:-1.240e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif22.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets51.7 +/- 29.7bp
Average Position of motif in Background57.6 +/- 33.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCTGA-
CCCCCTGCTGTG
 A C G T G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.69
Offset:4
Orientation:forward strand
Alignment:CCCTTGCTGA----
----TGCTGACTCA
 G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

NRL/MA0842.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CCCTTGCTGA-
AATTTGCTGAC
 G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCCTTGCTGA--
--CCTGCTGAGH
 G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCCTTGCTGA--
GGCCYCCTGCTGDGH
 A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCCTTGCTGA-----
AAANTGCTGACTNAG
 G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCCTTGCTGA----
TCNCCTGCTGNGNNN
 A C G T G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCTTGCTGA--
AAAATGCTGACT
 G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

PB0041.1_Mafb_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCTTGCTGA------
AAATTTGCTGACTTAGA
 A C G T G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCCTTGCTGA
BNTGDCCTTG----
 A C G T A C G T A C G T A C G T G T A C A G T C A G T C A C G T A C G T A C T G G T A C A C G T A C T G C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T