Information for 17-GTGGCGAMGG (Motif 39)

A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G
Reverse Opposite:
A T G C A G T C C A G T A C G T A G T C A C T G A G T C A G T C G T C A A T G C
p-value:1e-5
log p-value:-1.225e+01
Information Content per bp:1.765
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.0 +/- 28.7bp
Average Position of motif in Background53.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGGCGAMGG---
-TGGGGAAGGGCM
 A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCGAMGG--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------GTGGCGAMGG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTGGCGAMGG---
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GTGGCGAMGG----
GTTGCCATGGNAAC
 A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGGCGAMGG
CTGTTGCTAGGS
 A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTGGCGAMGG--
AAGGKGRCGCAGGCA
 A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTGGCGAMGG
----NGAAGC
 A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCGAMGG--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

ZBED1/MA0749.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGGCGAMGG
TATGTCGCGATAG
 A C G T A C G T A C G T A T C G A C G T T C A G C T A G A G T C A C T G G T C A G T C A A C T G A T C G
G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G