Information for 17-AATACAAAATTGC (Motif 29)

C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C T G A C G T C G T A A C G T A C G T
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.8 +/- 31.0bp
Average Position of motif in Background61.7 +/- 6.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0146.1_Mafk_2/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AATACAAAATTGC----
--GAAAAAATTGCAAGG
 C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G

PB0106.1_Arid5a_2/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATACAAAATTGC
CATACAATACGAAATAA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATACAAAATTGC
TCCAATCCACA-----
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AATACAAAATTGC---
----CAAGATGGCGGC
 C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AATACAAAATTGC
AATCAATTCAATAATT-
 A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AATACAAAATTGC
AAAACAAAGG---
 C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATACAAAATTGC
SSAATCCACANN---
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T

PB0186.1_Tcf3_2/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AATACAAAATTGC
AGCCGAAAAAAAAAT---
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T A C G T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATACAAAATTGC
CCAATAAAAA-----
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
T A G C A G T C G T C A C G T A A C G T G C T A C G T A G T C A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATACAAAATTGC
NATTCAAAT----
 C G T A C G T A A C G T C G T A A G T C C G T A G T C A C G T A C G T A A C G T A C G T A C T G A G T C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T