Information for 19-GCCCTGCCTAGCAGCA (Motif 25)

A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G A G T C A C G T C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.0 +/- 27.6bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCCCTGCCTAGCAGCA
TCCCAGMCRAGCCCC-
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA-
-----SCCTAGCAACAG
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA
-TGTTKCCTAGCAACM
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA--
---CCGCATAGCAACGGA
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCCTGCCTAGCAGCA------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA--
---TACCATAGCAACGGT
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA
GTCATGCHTGRCTGS-
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GCCCTGCCTAGCAGCA
---CTGTCTGTCACCT
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTGCCTAGCAGCA
NGTCACGCTTGGCTGC-
 A C G T A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GCCCTGCCTAGCAGCA
---TTTCCCAGAAN--
 A C T G A G T C A G T C A G T C A C G T A C T G A G T C A G T C A C G T C G T A A C T G A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T