Information for 12-GTMAKWGCTTWGC (Motif 22)

C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C T G A C G T A C T A G A G T C C G A T G T C A A C G T A C T G C G T A A G T C
p-value:1e-10
log p-value:-2.422e+01
Information Content per bp:1.858
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.4 +/- 11.8bp
Average Position of motif in Background72.2 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTMAKWGCTTWGC
TTAAGTGCTT---
 C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTMAKWGCTTWGC
NTAATKGTTT---
 C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
A G T C G C A T T C G A T C G A C A G T C A T G T A C G G A C T G A C T A G C T A C G T A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTMAKWGCTTWGC
-TAATTGATTA--
 C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A A C G T A C G T

Hmx1/MA0896.1/Jaspar

Match Rank:4
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTMAKWGCTTWGC
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GTMAKWGCTTWGC
ANNCATTAATTGCTNGN-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T A C G T

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTMAKWGCTTWGC
-TAATCGATTA--
 C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
A C G T C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A A C G T A C G T

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTMAKWGCTTWGC
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----GTMAKWGCTTWGC
ATTCNTTAATTGCTTGT-
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
G C T A G A C T A C G T A G T C C G A T G C A T G C A T C T G A C G T A A C G T A G C T C A T G A G T C A G C T A C G T A T C G A G C T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GTMAKWGCTTWGC
NNNTTAATTGGTTTTT
 A C G T A C G T A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
C G A T C G A T T A G C G A C T C G A T C G T A C G T A C G A T G A C T C T A G C T A G A G C T G A C T C A G T C A G T C A G T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTMAKWGCTTWGC
GCTAATTGCT----
 A C G T C T A G A C G T G T A C C G T A C A G T C G T A A C T G A G T C A C G T A G C T C G A T A C T G A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T A C G T A C G T A C G T A C G T