Information for 11-ATGAAGGASCWGGGAT (Motif 18)

C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
Reverse Opposite:
C G T A C G A T G T A C A G T C T A G C C G A T C T A G A T C G A C G T A T G C A G T C A C G T A G C T G A T C T G C A A G C T
p-value:1e-12
log p-value:-2.810e+01
Information Content per bp:1.725
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.1 +/- 21.5bp
Average Position of motif in Background67.7 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ATGAAGGASCWGGGAT------
--GAAGTANCACGAATNMRAGT
 C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T G A C T G A C T A G G A C T C T G A T A C G A G T C G C T A G A T C C T A G T C G A T G C A G A C T A C G T G T C A T C A G C T G A C A T G G A C T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGAAGGASCWGGGAT
AGGAAACAGCTG----
 C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGAAGGASCWGGGAT
GGAGAAAGGTGCGA----
 A C G T A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ATGAAGGASCWGGGAT-
-NNAGGGACAAGGGCNC
 C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------ATGAAGGASCWGGGAT
AAACAGACAAAGGAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------ATGAAGGASCWGGGAT
AGAAGAACAAAGGACTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATGAAGGASCWGGGAT
AAAACAAAGG---------
 A C G T A C G T A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ATGAAGGASCWGGGAT
-NGAAGC---------
 C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATGAAGGASCWGGGAT
AACAAAGG---------
 A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------ATGAAGGASCWGGGAT
ATAAGAACAAAGGACTA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T C T A G C T G A C G T A A C T G A T C G G T C A T A G C G A T C C G T A A C T G A C T G A C T G G C T A G C A T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T A C G T