Information for 10-GGCTAAGCCT (Motif 17)

A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
Reverse Opposite:
T G C A C T A G A C T G A G T C A C G T G C A T T C G A A C T G A T G C A G T C
p-value:1e-12
log p-value:-2.828e+01
Information Content per bp:1.863
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif68.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets61.0 +/- 17.6bp
Average Position of motif in Background41.2 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GGCTAAGCCT
-GCTAATCC-
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCTAAGCCT-
GGGGCCGAGGCCTG
 A C G T A C G T A C G T A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCTAAGCCT
--CTAGGCCT
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

Crx/MA0467.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCTAAGCCT---
--CTAATCCTCTT
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGCTAAGCCT
--CNAGGCCT
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCTAAGCCT---
NNGGCCACGCCTTTN
 A C G T A C G T A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PH0015.1_Crx/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAAGCCT-----
AGGCTAATCCCCAANG
 A C G T A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGCTAAGCCT
--ATAATCCC
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGCTAAGCCT-
-NYTAATCCYB
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T A C G T
A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GGCTAAGCCT
----CAGCC-
 A C T G A T C G A G T C A G C T C G T A C G T A A C T G A G T C A G T C A C G T
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T