Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-143 | -3.313e+02 | 0.0000 | 251.0 | 33.42% | 2046.4 | 4.40% | motif file (matrix) |
svg |
2 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-138 | -3.178e+02 | 0.0000 | 282.0 | 37.55% | 2913.1 | 6.27% | motif file (matrix) |
svg |
3 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-129 | -2.979e+02 | 0.0000 | 386.0 | 51.40% | 6490.4 | 13.96% | motif file (matrix) |
svg |
4 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-85 | -1.964e+02 | 0.0000 | 459.0 | 61.12% | 12472.2 | 26.84% | motif file (matrix) |
svg |
5 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-49 | -1.142e+02 | 0.0000 | 61.0 | 8.12% | 249.0 | 0.54% | motif file (matrix) |
svg |
6 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-35 | -8.167e+01 | 0.0000 | 165.0 | 21.97% | 3456.9 | 7.44% | motif file (matrix) |
svg |
7 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-34 | -7.860e+01 | 0.0000 | 107.0 | 14.25% | 1599.0 | 3.44% | motif file (matrix) |
svg |
8 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-26 | -6.179e+01 | 0.0000 | 39.0 | 5.19% | 218.9 | 0.47% | motif file (matrix) |
svg |
9 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-26 | -6.102e+01 | 0.0000 | 140.0 | 18.64% | 3162.2 | 6.80% | motif file (matrix) |
svg |
10 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-25 | -5.876e+01 | 0.0000 | 104.0 | 13.85% | 1939.3 | 4.17% | motif file (matrix) |
svg |
11 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-25 | -5.863e+01 | 0.0000 | 65.0 | 8.66% | 784.4 | 1.69% | motif file (matrix) |
svg |
12 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-24 | -5.569e+01 | 0.0000 | 89.0 | 11.85% | 1525.3 | 3.28% | motif file (matrix) |
svg |
13 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-21 | -4.872e+01 | 0.0000 | 127.0 | 16.91% | 3090.2 | 6.65% | motif file (matrix) |
svg |
14 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-19 | -4.604e+01 | 0.0000 | 86.0 | 11.45% | 1666.6 | 3.59% | motif file (matrix) |
svg |
15 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-19 | -4.583e+01 | 0.0000 | 84.0 | 11.19% | 1604.3 | 3.45% | motif file (matrix) |
svg |
16 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-19 | -4.404e+01 | 0.0000 | 92.0 | 12.25% | 1932.8 | 4.16% | motif file (matrix) |
svg |
17 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-17 | -4.097e+01 | 0.0000 | 45.0 | 5.99% | 541.6 | 1.17% | motif file (matrix) |
svg |
18 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-17 | -4.061e+01 | 0.0000 | 41.0 | 5.46% | 449.5 | 0.97% | motif file (matrix) |
svg |
19 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-16 | -3.687e+01 | 0.0000 | 66.0 | 8.79% | 1239.8 | 2.67% | motif file (matrix) |
svg |
20 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-15 | -3.627e+01 | 0.0000 | 49.0 | 6.52% | 727.3 | 1.56% | motif file (matrix) |
svg |
21 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-14 | -3.422e+01 | 0.0000 | 83.0 | 11.05% | 1922.1 | 4.14% | motif file (matrix) |
svg |
22 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-13 | -3.158e+01 | 0.0000 | 72.0 | 9.59% | 1604.9 | 3.45% | motif file (matrix) |
svg |
23 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-12 | -2.837e+01 | 0.0000 | 66.0 | 8.79% | 1493.0 | 3.21% | motif file (matrix) |
svg |
24 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-8 | -1.964e+01 | 0.0000 | 47.0 | 6.26% | 1094.0 | 2.35% | motif file (matrix) |
svg |
25 |
| Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer | 1e-7 | -1.750e+01 | 0.0000 | 49.0 | 6.52% | 1252.2 | 2.69% | motif file (matrix) |
svg |
26 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-7 | -1.672e+01 | 0.0000 | 27.0 | 3.60% | 485.9 | 1.05% | motif file (matrix) |
svg |
27 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-6 | -1.512e+01 | 0.0000 | 25.0 | 3.33% | 461.3 | 0.99% | motif file (matrix) |
svg |
28 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.202e+01 | 0.0001 | 24.0 | 3.20% | 515.1 | 1.11% | motif file (matrix) |
svg |
29 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-4 | -9.947e+00 | 0.0006 | 30.0 | 3.99% | 824.8 | 1.77% | motif file (matrix) |
svg |
30 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.823e+00 | 0.0007 | 266.0 | 35.42% | 13401.5 | 28.83% | motif file (matrix) |
svg |
31 |
| Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer | 1e-4 | -9.445e+00 | 0.0009 | 28.0 | 3.73% | 767.0 | 1.65% | motif file (matrix) |
svg |
32 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-3 | -8.506e+00 | 0.0023 | 23.0 | 3.06% | 607.9 | 1.31% | motif file (matrix) |
svg |
33 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -7.804e+00 | 0.0045 | 9.0 | 1.20% | 134.9 | 0.29% | motif file (matrix) |
svg |
34 |
| Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer | 1e-3 | -7.627e+00 | 0.0052 | 5.0 | 0.67% | 39.6 | 0.09% | motif file (matrix) |
svg |
35 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-3 | -7.271e+00 | 0.0072 | 21.0 | 2.80% | 582.0 | 1.25% | motif file (matrix) |
svg |
36 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-3 | -7.057e+00 | 0.0087 | 69.0 | 9.19% | 2882.5 | 6.20% | motif file (matrix) |
svg |
37 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-2 | -6.836e+00 | 0.0106 | 21.0 | 2.80% | 603.1 | 1.30% | motif file (matrix) |
svg |
38 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-2 | -6.774e+00 | 0.0109 | 31.0 | 4.13% | 1045.0 | 2.25% | motif file (matrix) |
svg |
39 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -6.688e+00 | 0.0116 | 35.0 | 4.66% | 1236.3 | 2.66% | motif file (matrix) |
svg |
40 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -6.650e+00 | 0.0118 | 77.0 | 10.25% | 3347.0 | 7.20% | motif file (matrix) |
svg |
41 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-2 | -6.431e+00 | 0.0143 | 39.0 | 5.19% | 1446.7 | 3.11% | motif file (matrix) |
svg |
42 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-2 | -6.376e+00 | 0.0147 | 218.0 | 29.03% | 11292.8 | 24.30% | motif file (matrix) |
svg |
43 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -6.244e+00 | 0.0164 | 47.0 | 6.26% | 1854.4 | 3.99% | motif file (matrix) |
svg |
44 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-2 | -6.236e+00 | 0.0164 | 95.0 | 12.65% | 4363.9 | 9.39% | motif file (matrix) |
svg |
45 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.773e+00 | 0.0252 | 91.0 | 12.12% | 4216.6 | 9.07% | motif file (matrix) |
svg |
46 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-2 | -5.470e+00 | 0.0333 | 108.0 | 14.38% | 5199.9 | 11.19% | motif file (matrix) |
svg |
47 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.455e+00 | 0.0333 | 20.0 | 2.66% | 635.3 | 1.37% | motif file (matrix) |
svg |
48 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-2 | -5.408e+00 | 0.0340 | 42.0 | 5.59% | 1687.6 | 3.63% | motif file (matrix) |
svg |
49 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.270e+00 | 0.0382 | 15.0 | 2.00% | 430.8 | 0.93% | motif file (matrix) |
svg |
50 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.012e+00 | 0.0484 | 12.0 | 1.60% | 319.0 | 0.69% | motif file (matrix) |
svg |
51 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-2 | -4.924e+00 | 0.0519 | 40.0 | 5.33% | 1637.0 | 3.52% | motif file (matrix) |
svg |
52 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-2 | -4.863e+00 | 0.0541 | 125.0 | 16.64% | 6267.8 | 13.49% | motif file (matrix) |
svg |
53 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.825e+00 | 0.0551 | 11.0 | 1.46% | 287.1 | 0.62% | motif file (matrix) |
svg |
54 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-2 | -4.820e+00 | 0.0551 | 47.0 | 6.26% | 2006.3 | 4.32% | motif file (matrix) |
svg |
55 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.635e+00 | 0.0642 | 11.0 | 1.46% | 295.6 | 0.64% | motif file (matrix) |
svg |