Information for 5-ACAAAKCTSNCCWGCT (Motif 7)

C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
Reverse Opposite:
T C G A C A T G T A G C C G T A C T A G A C T G G C T A T A C G C T G A A C T G G T A C G A C T A C G T C G A T C T A G A C G T
p-value:1e-14
log p-value:-3.394e+01
Information Content per bp:1.708
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.0 +/- 23.1bp
Average Position of motif in Background39.2 +/- 13.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACAAAKCTSNCCWGCT
-----CCTCACCTG--
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACAAAKCTSNCCWGCT
ACAAAGGNBCCT----
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAKCTSNCCWGCT
VRRACAAWGG---------
 A C G T A C G T A C G T C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAKCTSNCCWGCT
RNAACAATGG---------
 A C G T A C G T A C G T C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACAAAKCTSNCCWGCT
ACAAAG----------
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----ACAAAKCTSNCCWGCT
GNNNATTAATCCCTNCN---
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
C T A G G C T A G A C T C T A G C T G A G A C T C G A T C G T A C T G A A C G T G A T C A G T C A G T C A G C T G C A T G T A C G T C A A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:ACAAAKCTSNCCWGCT---
-------CCCCCTGCTGTG
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:ACAAAKCTSNCCWGCT----
-----GGCCYCCTGCTGDGH
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:ACAAAKCTSNCCWGCT-
-------TGCCCAGNHW
 C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PH0129.1_Otx1/Jaspar

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----ACAAAKCTSNCCWGCT
NNNAATTAATCCCCNCN---
 A C G T A C G T A C G T A C G T C G T A A G T C G C T A C G T A C G T A A C T G A G T C A G C T A T G C C A G T A G T C A G T C G C A T A T C G G T A C A G C T
T C G A C G A T C G T A C G T A C T G A G A C T C G A T C G T A C G T A A C G T G A T C A G T C A T G C A G T C G C A T G T A C G A C T A C G T A C G T A C G T