Information for 19-GGGATCAGTA (Motif 41)

A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
Reverse Opposite:
C G A T C G T A A G T C A C G T A C T G C G T A A C G T A G T C A G T C A G T C
p-value:1e-5
log p-value:-1.199e+01
Information Content per bp:1.960
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 30.1bp
Average Position of motif in Background57.7 +/- 18.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGTA
NGGATTAN--
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGATCAGTA-
-DGATCRATAN
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A A C G T
A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

PH0129.1_Otx1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGATCAGTA---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0138.1_Pitx2/Jaspar

Match Rank:4
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGGATCAGTA---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGTA
GGGATTANN-
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGATCAGTA
TGGAACAGMA
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

GSC/MA0648.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGGATCAGTA
NNGGATTAGN-
 A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T

PH0130.1_Otx2/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----GGGATCAGTA---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGGATCAGTA
GGGATTAA--
 A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GGGATCAGTA--
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A C G T A G T C C G T A A C T G A C G T C G T A A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T