Information for 18-GACTTGATTG (Motif 39)

A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G
Reverse Opposite:
A T G C C G T A G T C A A C G T A G T C C G T A C G T A A C T G A C G T A G T C
p-value:1e-5
log p-value:-1.358e+01
Information Content per bp:1.944
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.0 +/- 27.9bp
Average Position of motif in Background49.6 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.78
Offset:3
Orientation:reverse strand
Alignment:GACTTGATTG-
---TTGATTGN
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0026.1_Duxbl/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GACTTGATTG-----
NNNNGTTGATTGGGTCG
 A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GACTTGATTG---
--CTTGAGTGGCT
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T
A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GACTTGATTG----
--TTTGATTGATGN
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GACTTGATTG
TAATTGATTA
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GACTTGATTG--
--ATTGATTYND
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GACTTGATTG
CCACTTGAA--
 A C G T A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GACTTGATTG-----
---BTGABTGACAGS
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GACTTGATTG--
--BTBRAGTGSN
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0144.1_Lef1_2/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GACTTGATTG------
NNANTGATTGATNTTN
 A C T G C G T A A G T C A C G T A C G T A C T G C G T A A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C