Information for 15-RGCGWGCCYGRCC (Motif 26)

C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T A G T C C T A G A C T G A C T G A G T C C G T A A T G C A C T G A G T C A G C T
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.4 +/- 16.1bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:RGCGWGCCYGRCC
AGCGCGCC-----
 C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:RGCGWGCCYGRCC
---GAGSCCGAGC
 C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:RGCGWGCCYGRCC--
-ACATGCCCGGGCAT
 C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C A C G T A C G T
A C G T C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----RGCGWGCCYGRCC
CAAAGGCGTGGCCAG--
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGCGWGCCYGRCC--
GGNGCGNCTGTTNNN
 C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RGCGWGCCYGRCC
NTCGCGCGCCTTNNN
 A C G T A C G T C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGCGWGCCYGRCC
TTGCGTGCVA----
 A C G T C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RGCGWGCCYGRCC
TGCGTG-------
 C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RGCGWGCCYGRCC
NNCGCGTGNN-----
 A C G T A C G T C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T A C G T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--RGCGWGCCYGRCC
ANCGCGCGCCCTTNN
 A C G T A C G T C T G A A C T G A G T C A T C G G C A T A C T G A G T C A G T C A G C T A C T G C T G A A G T C A G T C
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T