Information for 11-TKCATTAGCA (Motif 18)

C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A
Reverse Opposite:
C G A T C T A G A T G C G A C T G C T A G T C A A C G T T C A G T G A C G T C A
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.734
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.26%
Number of Background Sequences with motif433.6
Percentage of Background Sequences with motif0.93%
Average Position of motif in Targets47.1 +/- 24.4bp
Average Position of motif in Background49.5 +/- 33.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TKCATTAGCA--
CTCATTTGCATW
 C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TKCATTAGCA--
BTVATTWGCATA
 C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TKCATTAGCA--
---ATTTGCATA
 C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T
A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A

Pou2f3/MA0627.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TKCATTAGCA-----
TNTAATTTGCATACNA
 A C G T C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TKCATTAGCA-----
TNTAATTTGCATACNA
 A C G T C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TKCATTAGCA-----
TNTAATTTGCATANNN
 A C G T C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU3F2/MA0787.1/Jaspar

Match Rank:7
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TKCATTAGCA---
-TAATTTGCATAA
 C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A A C G T A C G T A C G T
A C G T C G A T T G C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A A G C T C G T A G C T A

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TKCATTAGCA
-YCATTAMC-
 C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A
A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T

HOXA2/MA0900.1/Jaspar

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TKCATTAGCA
CCTAATTACC-
 A C G T C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A
T A G C T A G C G A C T T G C A T C G A A C G T G A C T G C T A T A G C T A G C A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TKCATTAGCA
ACTAATTAGC-
 A C G T C A G T A C T G A G T C G T C A A C G T C G A T C T G A A T C G A G T C G C T A
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T