p-value: | 1e-12 |
log p-value: | -2.969e+01 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 2.13% |
Number of Background Sequences with motif | 71.8 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 52.3 +/- 26.1bp |
Average Position of motif in Background | 42.3 +/- 31.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer
Match Rank: | 1 |
Score: | 0.71 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAATGGT-- --NTAATKGTTT |
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Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTTAATGGT -GKTAATGR- |
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BARX1/MA0875.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAATGGT --NTAATTGN |
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NFYA/MA0060.2/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GCTTAATGGT--- AGAGTGCTGATTGGTCCA |
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PB0135.1_Hoxa3_2/Jaspar
Match Rank: | 5 |
Score: | 0.67 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTAATGGT---- CCTTAATNGNTTTT |
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Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 6 |
Score: | 0.67 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GCTTAATGGT- -GTTAATGGCC |
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BARHL2/MA0635.1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GCTTAATGGT GCTAAACGGT |
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NKX6-2/MA0675.1/Jaspar
Match Rank: | 8 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTTAATGGT --TTAATTAN |
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MYBL1/MA0776.1/Jaspar
Match Rank: | 9 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GCTTAATGGT ACCGTTAACGGT |
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Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
Match Rank: | 10 |
Score: | 0.64 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTAATGGT --CTAATKGV |
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