Information for 9-GCWTTARTCYGGG (Motif 13)

A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G
Reverse Opposite:
A G T C A G T C G T A C C T A G A T C G G T C A A G C T A C G T C G T A C G T A C G A T A C T G T A G C
p-value:1e-13
log p-value:-3.101e+01
Information Content per bp:1.741
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif65.3
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets61.8 +/- 11.9bp
Average Position of motif in Background44.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0185.1_Tcf1_2/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCWTTARTCYGGG---
--NNTAATCCNGNCNN
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GCWTTARTCYGGG
---TTAATCCT--
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCWTTARTCYGGG-
NNAATTAGTCACGGT
 A C G T A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCWTTARTCYGGG
---TTAATCCG--
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G
A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GCWTTARTCYGGG
--TTTAAT-----
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G
A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Dmbx1/MA0883.1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCWTTARTCYGGG---
NNNATTAATCCGNTTNA
 A C G T A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCWTTARTCYGGG---
NNNATTAATCCGNTTNA
 A C G T A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T A C G T A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GCWTTARTCYGGG---
-------TNNGGGCAG
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCWTTARTCYGGG--
-----WDNCTGGGCA
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCWTTARTCYGGG
---TTAATCCC--
 A C T G G T A C G C T A A C G T A C G T G T C A T C G A A C G T A T G C G A T C C A T G A C T G A C T G
A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T